Coexpression cluster: Cluster_42 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 28.39% (44/155) 2.77 0.0 0.0
GO:0006364 rRNA processing 7.74% (12/155) 5.92 0.0 0.0
GO:0016072 rRNA metabolic process 7.74% (12/155) 5.92 0.0 0.0
GO:0034470 ncRNA processing 9.03% (14/155) 4.87 0.0 0.0
GO:0016070 RNA metabolic process 18.06% (28/155) 2.73 0.0 0.0
GO:0006396 RNA processing 10.32% (16/155) 4.07 0.0 0.0
GO:0005488 binding 44.52% (69/155) 1.38 0.0 0.0
GO:0097159 organic cyclic compound binding 33.55% (52/155) 1.65 0.0 0.0
GO:1901363 heterocyclic compound binding 33.55% (52/155) 1.65 0.0 0.0
GO:0090304 nucleic acid metabolic process 18.06% (28/155) 2.5 0.0 0.0
GO:0034660 ncRNA metabolic process 9.03% (14/155) 3.91 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 18.71% (29/155) 2.35 0.0 0.0
GO:0046483 heterocycle metabolic process 18.71% (29/155) 2.24 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 18.71% (29/155) 2.22 0.0 0.0
GO:0022613 ribonucleoprotein complex biogenesis 4.52% (7/155) 5.77 0.0 0.0
GO:0044085 cellular component biogenesis 4.52% (7/155) 5.77 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 18.71% (29/155) 2.17 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 19.35% (30/155) 2.02 0.0 0.0
GO:0042254 ribosome biogenesis 3.87% (6/155) 5.69 0.0 0.0
GO:0032040 small-subunit processome 3.23% (5/155) 6.16 0.0 0.0
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.87% (6/155) 5.2 0.0 0.0
GO:0030684 preribosome 3.23% (5/155) 5.75 0.0 0.0
GO:0003723 RNA binding 7.1% (11/155) 3.25 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 14.84% (23/155) 1.92 0.0 0.0
GO:0034062 5'-3' RNA polymerase activity 3.87% (6/155) 4.76 0.0 0.0
GO:0097747 RNA polymerase activity 3.87% (6/155) 4.76 0.0 0.0
GO:0032555 purine ribonucleotide binding 14.84% (23/155) 1.89 0.0 0.0
GO:0017076 purine nucleotide binding 14.84% (23/155) 1.88 0.0 0.0
GO:0032553 ribonucleotide binding 14.84% (23/155) 1.82 0.0 1e-06
GO:0097367 carbohydrate derivative binding 14.84% (23/155) 1.8 0.0 1e-06
GO:1990904 ribonucleoprotein complex 3.87% (6/155) 4.42 0.0 2e-06
GO:0016779 nucleotidyltransferase activity 4.52% (7/155) 3.87 0.0 3e-06
GO:0006807 nitrogen compound metabolic process 20.0% (31/155) 1.38 1e-06 5e-06
GO:0005524 ATP binding 12.26% (19/155) 1.91 1e-06 5e-06
GO:0043170 macromolecule metabolic process 18.06% (28/155) 1.47 1e-06 5e-06
GO:0032559 adenyl ribonucleotide binding 12.26% (19/155) 1.87 1e-06 7e-06
GO:0030554 adenyl nucleotide binding 12.26% (19/155) 1.86 1e-06 7e-06
GO:0008144 drug binding 12.9% (20/155) 1.77 2e-06 9e-06
GO:0044237 cellular metabolic process 20.0% (31/155) 1.3 2e-06 1.2e-05
GO:0140098 catalytic activity, acting on RNA 5.16% (8/155) 2.93 1e-05 5.5e-05
GO:0005515 protein binding 11.61% (18/155) 1.67 1.4e-05 7.8e-05
GO:0005730 nucleolus 1.94% (3/155) 5.69 1.5e-05 8.2e-05
GO:0043168 anion binding 15.48% (24/155) 1.35 1.9e-05 0.000102
GO:0003674 molecular_function 49.68% (77/155) 0.57 2e-05 0.000104
GO:0000166 nucleotide binding 14.84% (23/155) 1.38 2.3e-05 0.000111
GO:1901265 nucleoside phosphate binding 14.84% (23/155) 1.38 2.3e-05 0.000111
GO:0005634 nucleus 7.74% (12/155) 2.08 2.8e-05 0.000135
GO:0036094 small molecule binding 15.48% (24/155) 1.31 3.1e-05 0.000148
GO:0001522 pseudouridine synthesis 1.94% (3/155) 5.2 5.2e-05 0.000241
GO:0043229 intracellular organelle 9.68% (15/155) 1.71 5.5e-05 0.000246
GO:0043226 organelle 9.68% (15/155) 1.71 5.6e-05 0.000249
GO:0009451 RNA modification 2.58% (4/155) 4.1 7.4e-05 0.000322
GO:0043227 membrane-bounded organelle 7.74% (12/155) 1.93 7.8e-05 0.000326
GO:0043231 intracellular membrane-bounded organelle 7.74% (12/155) 1.93 7.8e-05 0.000326
GO:0044238 primary metabolic process 19.35% (30/155) 0.98 0.000207 0.000852
GO:0071840 cellular component organization or biogenesis 4.52% (7/155) 2.45 0.000296 0.001193
GO:0071704 organic substance metabolic process 20.0% (31/155) 0.93 0.000322 0.001278
GO:0030515 snoRNA binding 1.29% (2/155) 5.84 0.000401 0.001562
GO:0016887 ATPase activity 3.87% (6/155) 2.55 0.000558 0.002139
GO:0097659 nucleic acid-templated transcription 5.81% (9/155) 1.91 0.000685 0.002537
GO:0006351 transcription, DNA-templated 5.81% (9/155) 1.91 0.000685 0.002537
GO:0009982 pseudouridine synthase activity 1.29% (2/155) 5.42 0.000796 0.002901
GO:0008168 methyltransferase activity 3.23% (5/155) 2.75 0.00088 0.003155
GO:0034654 nucleobase-containing compound biosynthetic process 6.45% (10/155) 1.71 0.000988 0.003491
GO:0032774 RNA biosynthetic process 5.81% (9/155) 1.77 0.001316 0.004577
GO:0004386 helicase activity 1.94% (3/155) 3.69 0.001526 0.005224
GO:0016741 transferase activity, transferring one-carbon groups 3.23% (5/155) 2.56 0.001594 0.005375
GO:0019438 aromatic compound biosynthetic process 6.45% (10/155) 1.59 0.001902 0.006322
GO:0018130 heterocycle biosynthetic process 6.45% (10/155) 1.56 0.002214 0.007251
GO:0009987 cellular process 23.87% (37/155) 0.67 0.002252 0.007272
GO:1901362 organic cyclic compound biosynthetic process 6.45% (10/155) 1.49 0.003103 0.009878
GO:0016740 transferase activity 9.03% (14/155) 1.18 0.003695 0.011599
GO:0016866 intramolecular transferase activity 1.29% (2/155) 4.25 0.004595 0.014227
GO:0016772 transferase activity, transferring phosphorus-containing groups 5.16% (8/155) 1.59 0.00523 0.015972
GO:0044271 cellular nitrogen compound biosynthetic process 7.1% (11/155) 1.29 0.005609 0.016901
GO:0032991 protein-containing complex 5.16% (8/155) 1.45 0.009137 0.027172
GO:0042274 ribosomal small subunit biogenesis 0.65% (1/155) 6.42 0.011643 0.028293
GO:0000176 nuclear exosome (RNase complex) 0.65% (1/155) 6.42 0.011643 0.028293
GO:0004014 adenosylmethionine decarboxylase activity 0.65% (1/155) 6.42 0.011643 0.028293
GO:0006595 polyamine metabolic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0006596 polyamine biosynthetic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0006597 spermine biosynthetic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0008215 spermine metabolic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0008216 spermidine metabolic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0042401 cellular biogenic amine biosynthetic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0003724 RNA helicase activity 0.65% (1/155) 6.42 0.011643 0.028293
GO:0005732 small nucleolar ribonucleoprotein complex 0.65% (1/155) 6.42 0.011643 0.028293
GO:0006360 transcription by RNA polymerase I 0.65% (1/155) 6.42 0.011643 0.028293
GO:0009309 amine biosynthetic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0034457 Mpp10 complex 0.65% (1/155) 6.42 0.011643 0.028293
GO:0008295 spermidine biosynthetic process 0.65% (1/155) 6.42 0.011643 0.028293
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 0.65% (1/155) 6.42 0.011643 0.028293
GO:0032259 methylation 1.29% (2/155) 3.52 0.012804 0.030783
GO:0016462 pyrophosphatase activity 3.87% (6/155) 1.63 0.013073 0.031101
GO:0017111 nucleoside-triphosphatase activity 3.87% (6/155) 1.69 0.011051 0.032435
GO:0034645 cellular macromolecule biosynthetic process 5.81% (9/155) 1.25 0.01384 0.032581
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.87% (6/155) 1.61 0.014176 0.033029
GO:0016853 isomerase activity 1.94% (3/155) 2.52 0.015368 0.035082
GO:0016817 hydrolase activity, acting on acid anhydrides 3.87% (6/155) 1.58 0.015342 0.035381
GO:0043167 ion binding 16.77% (26/155) 0.62 0.016627 0.037577
GO:0005525 GTP binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0032549 ribonucleoside binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0032550 purine ribonucleoside binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0001882 nucleoside binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0032561 guanyl ribonucleotide binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0001883 purine nucleoside binding 2.58% (4/155) 2.0 0.017962 0.038297
GO:0019001 guanyl nucleotide binding 2.58% (4/155) 1.95 0.020112 0.042479
GO:0009059 macromolecule biosynthetic process 5.81% (9/155) 1.15 0.020983 0.043909
GO:0000178 exosome (RNase complex) 0.65% (1/155) 5.42 0.023151 0.044719
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 0.65% (1/155) 5.42 0.023151 0.044719
GO:0008408 3'-5' exonuclease activity 0.65% (1/155) 5.42 0.023151 0.044719
GO:0034708 methyltransferase complex 0.65% (1/155) 5.42 0.023151 0.044719
GO:0030488 tRNA methylation 0.65% (1/155) 5.42 0.023151 0.044719
GO:0031515 tRNA (m1A) methyltransferase complex 0.65% (1/155) 5.42 0.023151 0.044719
GO:0043527 tRNA methyltransferase complex 0.65% (1/155) 5.42 0.023151 0.044719
GO:0030490 maturation of SSU-rRNA 0.65% (1/155) 5.42 0.023151 0.044719
GO:0016423 tRNA (guanine) methyltransferase activity 0.65% (1/155) 5.42 0.023151 0.044719
GO:0044249 cellular biosynthetic process 7.1% (11/155) 0.97 0.02502 0.04792
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Saccharomyces cerevisiae HCCA Cluster_5 0.018 OF Compare
Saccharomyces cerevisiae HCCA Cluster_8 0.027 OF Compare
Saccharomyces cerevisiae HCCA Cluster_13 0.018 OF Compare
Saccharomyces cerevisiae HCCA Cluster_16 0.404 OF Compare
Saccharomyces cerevisiae HCCA Cluster_54 0.07 OF Compare
Saccharomyces cerevisiae HCCA Cluster_69 0.06 OF Compare
Aspergillus flavus HCCA Cluster_2 0.054 OF Compare
Aspergillus flavus HCCA Cluster_9 0.031 OF Compare
Aspergillus fumigatus HCCA Cluster_7 0.067 OF Compare
Aspergillus fumigatus HCCA Cluster_28 0.565 OF Compare
Aspergillus fumigatus HCCA Cluster_92 0.045 OF Compare
Aspergillus nidulans HCCA Cluster_11 0.375 OF Compare
Aspergillus nidulans HCCA Cluster_46 0.019 OF Compare
Aspergillus nidulans HCCA Cluster_55 0.147 OF Compare
Aspergillus nidulans HCCA Cluster_66 0.022 OF Compare
Aspergillus nidulans HCCA Cluster_96 0.078 OF Compare
Aspergillus nidulans HCCA Cluster_107 0.076 OF Compare
Aspergillus niger HCCA Cluster_22 0.044 OF Compare
Aspergillus niger HCCA Cluster_26 0.038 OF Compare
Aspergillus niger HCCA Cluster_35 0.247 OF Compare
Aspergillus niger HCCA Cluster_48 0.027 OF Compare
Aspergillus niger HCCA Cluster_84 0.263 OF Compare
Candida albicans HCCA Cluster_13 0.144 OF Compare
Candida albicans HCCA Cluster_15 0.023 OF Compare
Candida albicans HCCA Cluster_38 0.023 OF Compare
Candida albicans HCCA Cluster_41 0.306 OF Compare
Candida albicans HCCA Cluster_53 0.169 OF Compare
Coprinopsis cinerea HCCA Cluster_34 0.2 OF Compare
Coprinopsis cinerea HCCA Cluster_58 0.024 OF Compare
Coprinopsis cinerea HCCA Cluster_76 0.094 OF Compare
Coprinopsis cinerea HCCA Cluster_93 0.019 OF Compare
Coprinopsis cinerea HCCA Cluster_108 0.049 OF Compare
Cryptococcus neoformans HCCA Cluster_6 0.068 OF Compare
Cryptococcus neoformans HCCA Cluster_13 0.025 OF Compare
Cryptococcus neoformans HCCA Cluster_14 0.181 OF Compare
Cryptococcus neoformans HCCA Cluster_26 0.249 OF Compare
Cryptococcus neoformans HCCA Cluster_53 0.128 OF Compare
Dichomitus squalens HCCA Cluster_24 0.137 OF Compare
Komagataella phaffii HCCA Cluster_4 0.099 OF Compare
Komagataella phaffii HCCA Cluster_18 0.277 OF Compare
Komagataella phaffii HCCA Cluster_29 0.04 OF Compare
Komagataella phaffii HCCA Cluster_33 0.025 OF Compare
Komagataella phaffii HCCA Cluster_41 0.022 OF Compare
Komagataella phaffii HCCA Cluster_47 0.075 OF Compare
Komagataella phaffii HCCA Cluster_55 0.052 OF Compare
Neurospora crassa HCCA Cluster_21 0.106 OF Compare
Neurospora crassa HCCA Cluster_22 0.024 OF Compare
Neurospora crassa HCCA Cluster_26 0.409 OF Compare
Neurospora crassa HCCA Cluster_60 0.228 OF Compare
Postia placenta HCCA Cluster_10 0.02 OF Compare
Postia placenta HCCA Cluster_41 0.023 OF Compare
Postia placenta HCCA Cluster_66 0.054 OF Compare
Puccinia striiformis HCCA Cluster_2 0.018 OF Compare
Puccinia striiformis HCCA Cluster_15 0.022 OF Compare
Puccinia striiformis HCCA Cluster_21 0.055 OF Compare
Puccinia striiformis HCCA Cluster_26 0.044 OF Compare
Puccinia striiformis HCCA Cluster_31 0.048 OF Compare
Puccinia striiformis HCCA Cluster_55 0.02 OF Compare
Puccinia striiformis HCCA Cluster_77 0.094 OF Compare
Puccinia striiformis HCCA Cluster_98 0.131 OF Compare
Pyricularia oryzae HCCA Cluster_1 0.492 OF Compare
Pyricularia oryzae HCCA Cluster_23 0.02 OF Compare
Pyricularia oryzae HCCA Cluster_73 0.024 OF Compare
Pyricularia oryzae HCCA Cluster_85 0.031 OF Compare
Pyricularia oryzae HCCA Cluster_104 0.017 OF Compare
Pyricularia oryzae HCCA Cluster_110 0.018 OF Compare
Pyricularia oryzae HCCA Cluster_115 0.02 OF Compare
Yarrowia lipolytica HCCA Cluster_4 0.078 OF Compare
Yarrowia lipolytica HCCA Cluster_21 0.467 OF Compare
Yarrowia lipolytica HCCA Cluster_31 0.028 OF Compare
Yarrowia lipolytica HCCA Cluster_52 0.045 OF Compare
Schizosaccharomyces pombe HCCA Cluster_10 0.031 OF Compare
Schizosaccharomyces pombe HCCA Cluster_14 0.14 OF Compare
Schizosaccharomyces pombe HCCA Cluster_32 0.054 OF Compare
Schizosaccharomyces pombe HCCA Cluster_33 0.201 OF Compare
Schizosaccharomyces pombe HCCA Cluster_37 0.02 OF Compare
Schizosaccharomyces pombe HCCA Cluster_41 0.063 OF Compare
Trichoderma reesei HCCA Cluster_2 0.03 OF Compare
Trichoderma reesei HCCA Cluster_21 0.414 OF Compare
Trichoderma reesei HCCA Cluster_30 0.023 OF Compare
Trichoderma reesei HCCA Cluster_40 0.019 OF Compare
Trichoderma reesei HCCA Cluster_49 0.057 OF Compare
Trichoderma reesei HCCA Cluster_73 0.039 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_5 0.018 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_32 0.239 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_58 0.219 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_81 0.047 OF Compare
Sequences (155) (download table)

InterPro Domains

GO Terms

Family Terms