Welcome to fungi.guru
a platform dedicated to the visualization and analysis of fungal gene expression data and co-expression networks.
Start your analysis by entering the gene ID, Pfam domain or Gene Ontology term. Alternatively, you can search by using keywords (Search/Search Advanced/Description) or BLAST (Search/BLAST).

Quickly retrieve genes

Use our Search function or BLAST to quickly find genes of interest.

Expression profiles and expression specificity

See in which tissues and conditions a gene of interest is expressed or find genes specifically expressed in a certain tissue/condition.

Co-expression networks

Browse co-expression networks based on thousands of publicly available RNA-Seq samples! Find clusters of co-expressed genes enriched for certain functions.

Co-expression clusters

Browse co-expression networks based on thousands of publicly available RNA-Seq samples! Find cluster of co-expressed genes enriched for certain functions.

Analyse custom gene sets

Create heatmap and expression profiles for user defined sets of genes. Build a custom co-expression network for a set of selected genes.

fungi.guru is based on the CoNekT framework (open-source!)

Head to GitHub for a copy of the source if you want to host your own version with in-house data or other species!

News

Fungi.guru is up! You can read the manuscript describing the database here: https://www.biorxiv.org/content/10.1101/2020.06.26.174581v1.abstract

by Marek (2020-07-10 11:21)

Tweets by LabMutwil