Coexpression cluster: Cluster_28 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 7.97% (11/138) 5.68 0.0 0.0
GO:0016072 rRNA metabolic process 7.97% (11/138) 5.68 0.0 0.0
GO:0022613 ribonucleoprotein complex biogenesis 5.8% (8/138) 5.8 0.0 0.0
GO:0034470 ncRNA processing 8.7% (12/138) 4.5 0.0 0.0
GO:0044085 cellular component biogenesis 5.8% (8/138) 5.66 0.0 0.0
GO:0042254 ribosome biogenesis 5.07% (7/138) 5.76 0.0 0.0
GO:0006396 RNA processing 10.14% (14/138) 3.61 0.0 0.0
GO:0003676 nucleic acid binding 21.74% (30/138) 2.01 0.0 0.0
GO:0034660 ncRNA metabolic process 8.7% (12/138) 3.54 0.0 0.0
GO:0016070 RNA metabolic process 15.94% (22/138) 2.23 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 17.39% (24/138) 1.9 0.0 0.0
GO:0090304 nucleic acid metabolic process 15.94% (22/138) 1.98 0.0 1e-06
GO:0030684 preribosome 3.62% (5/138) 5.45 0.0 1e-06
GO:0046483 heterocycle metabolic process 17.39% (24/138) 1.77 0.0 2e-06
GO:0006725 cellular aromatic compound metabolic process 17.39% (24/138) 1.76 0.0 2e-06
GO:1901360 organic cyclic compound metabolic process 17.39% (24/138) 1.7 0.0 4e-06
GO:0032040 small-subunit processome 2.9% (4/138) 5.54 1e-06 8e-06
GO:1990904 ribonucleoprotein complex 4.35% (6/138) 4.19 1e-06 8e-06
GO:0034641 cellular nitrogen compound metabolic process 17.39% (24/138) 1.5 3e-06 3.5e-05
GO:0035639 purine ribonucleoside triphosphate binding 15.22% (21/138) 1.56 8e-06 8.7e-05
GO:0032555 purine ribonucleotide binding 15.22% (21/138) 1.54 9e-06 0.0001
GO:1901363 heterocyclic compound binding 26.81% (37/138) 1.04 1.1e-05 0.0001
GO:0097159 organic cyclic compound binding 26.81% (37/138) 1.04 1.1e-05 0.0001
GO:0017076 purine nucleotide binding 15.22% (21/138) 1.53 1e-05 0.000108
GO:0032553 ribonucleotide binding 15.22% (21/138) 1.49 1.6e-05 0.000143
GO:0097367 carbohydrate derivative binding 15.22% (21/138) 1.46 2.1e-05 0.000188
GO:0005524 ATP binding 13.04% (18/138) 1.59 2.8e-05 0.000234
GO:0030554 adenyl nucleotide binding 13.04% (18/138) 1.56 3.5e-05 0.000271
GO:0071840 cellular component organization or biogenesis 6.52% (9/138) 2.46 3.6e-05 0.000272
GO:0032559 adenyl ribonucleotide binding 13.04% (18/138) 1.57 3.3e-05 0.000272
GO:0005488 binding 34.78% (48/138) 0.75 8e-05 0.000587
GO:0008144 drug binding 13.04% (18/138) 1.4 0.000152 0.001085
GO:1901265 nucleoside phosphate binding 15.94% (22/138) 1.18 0.000247 0.001653
GO:0000166 nucleotide binding 15.94% (22/138) 1.18 0.000247 0.001653
GO:0043170 macromolecule metabolic process 17.39% (24/138) 1.06 0.000402 0.002618
GO:0003723 RNA binding 5.07% (7/138) 2.33 0.00047 0.002978
GO:0043168 anion binding 15.94% (22/138) 1.09 0.000555 0.003418
GO:0036094 small molecule binding 15.94% (22/138) 1.06 0.000773 0.004639
GO:0006807 nitrogen compound metabolic process 18.84% (26/138) 0.93 0.000935 0.005469
GO:0005634 nucleus 7.25% (10/138) 1.69 0.001068 0.00609
GO:0009451 RNA modification 2.17% (3/138) 3.54 0.002011 0.010663
GO:0004386 helicase activity 2.17% (3/138) 3.54 0.002011 0.010663
GO:0005730 nucleolus 1.45% (2/138) 4.8 0.001985 0.011037
GO:0044237 cellular metabolic process 18.84% (26/138) 0.84 0.002254 0.011678
GO:0043227 membrane-bounded organelle 7.25% (10/138) 1.53 0.002414 0.011966
GO:0043231 intracellular membrane-bounded organelle 7.25% (10/138) 1.53 0.002414 0.011966
GO:0001522 pseudouridine synthesis 1.45% (2/138) 4.54 0.002949 0.014306
GO:0016887 ATPase activity 3.62% (5/138) 2.22 0.004359 0.020706
GO:0043226 organelle 8.7% (12/138) 1.24 0.004939 0.02252
GO:0043229 intracellular organelle 8.7% (12/138) 1.24 0.004939 0.02252
GO:0140098 catalytic activity, acting on RNA 3.62% (5/138) 2.04 0.007396 0.033063
GO:0008168 methyltransferase activity 2.9% (4/138) 2.27 0.009444 0.041409
GO:0036265 RNA (guanine-N7)-methylation 0.72% (1/138) 6.12 0.014341 0.044185
GO:0008649 rRNA methyltransferase activity 0.72% (1/138) 6.12 0.014341 0.044185
GO:0005732 small nucleolar ribonucleoprotein complex 0.72% (1/138) 6.12 0.014341 0.044185
GO:0000154 rRNA modification 0.72% (1/138) 6.12 0.014341 0.044185
GO:0034457 Mpp10 complex 0.72% (1/138) 6.12 0.014341 0.044185
GO:0042274 ribosomal small subunit biogenesis 0.72% (1/138) 6.12 0.014341 0.044185
GO:0000176 nuclear exosome (RNase complex) 0.72% (1/138) 6.12 0.014341 0.044185
GO:0006360 transcription by RNA polymerase I 0.72% (1/138) 6.12 0.014341 0.044185
GO:0031167 rRNA methylation 0.72% (1/138) 6.12 0.014341 0.044185
GO:0006221 pyrimidine nucleotide biosynthetic process 0.72% (1/138) 6.12 0.014341 0.044185
GO:0003883 CTP synthase activity 0.72% (1/138) 6.12 0.014341 0.044185
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 0.72% (1/138) 6.12 0.014341 0.044185
GO:0070475 rRNA base methylation 0.72% (1/138) 6.12 0.014341 0.044185
GO:0006220 pyrimidine nucleotide metabolic process 0.72% (1/138) 6.12 0.014341 0.044185
GO:0070476 rRNA (guanine-N7)-methylation 0.72% (1/138) 6.12 0.014341 0.044185
GO:0140102 catalytic activity, acting on a rRNA 0.72% (1/138) 6.12 0.014341 0.044185
GO:0003724 RNA helicase activity 0.72% (1/138) 6.12 0.014341 0.044185
GO:0016435 rRNA (guanine) methyltransferase activity 0.72% (1/138) 6.12 0.014341 0.044185
GO:0030515 snoRNA binding 0.72% (1/138) 6.12 0.014341 0.044185
GO:0000469 cleavage involved in rRNA processing 0.72% (1/138) 6.12 0.014341 0.044185
GO:0032259 methylation 1.45% (2/138) 3.66 0.010317 0.044382
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Saccharomyces cerevisiae HCCA Cluster_8 0.034 OF Compare
Saccharomyces cerevisiae HCCA Cluster_16 0.41 OF Compare
Saccharomyces cerevisiae HCCA Cluster_43 0.025 OF Compare
Saccharomyces cerevisiae HCCA Cluster_54 0.022 OF Compare
Saccharomyces cerevisiae HCCA Cluster_69 0.053 OF Compare
Aspergillus flavus HCCA Cluster_2 0.053 OF Compare
Aspergillus flavus HCCA Cluster_9 0.021 OF Compare
Aspergillus nidulans HCCA Cluster_11 0.427 OF Compare
Aspergillus nidulans HCCA Cluster_55 0.148 OF Compare
Aspergillus nidulans HCCA Cluster_96 0.086 OF Compare
Aspergillus nidulans HCCA Cluster_107 0.071 OF Compare
Aspergillus niger HCCA Cluster_22 0.08 OF Compare
Aspergillus niger HCCA Cluster_26 0.037 OF Compare
Aspergillus niger HCCA Cluster_35 0.302 OF Compare
Aspergillus niger HCCA Cluster_84 0.206 OF Compare
Candida albicans HCCA Cluster_13 0.167 OF Compare
Candida albicans HCCA Cluster_15 0.021 OF Compare
Candida albicans HCCA Cluster_41 0.299 OF Compare
Candida albicans HCCA Cluster_53 0.128 OF Compare
Coprinopsis cinerea HCCA Cluster_20 0.022 OF Compare
Coprinopsis cinerea HCCA Cluster_34 0.208 OF Compare
Coprinopsis cinerea HCCA Cluster_58 0.021 OF Compare
Coprinopsis cinerea HCCA Cluster_76 0.084 OF Compare
Coprinopsis cinerea HCCA Cluster_108 0.026 OF Compare
Cryptococcus neoformans HCCA Cluster_6 0.063 OF Compare
Cryptococcus neoformans HCCA Cluster_13 0.029 OF Compare
Cryptococcus neoformans HCCA Cluster_14 0.149 OF Compare
Cryptococcus neoformans HCCA Cluster_26 0.245 OF Compare
Cryptococcus neoformans HCCA Cluster_53 0.155 OF Compare
Dichomitus squalens HCCA Cluster_24 0.111 OF Compare
Dichomitus squalens HCCA Cluster_40 0.018 OF Compare
Fusarium graminearum HCCA Cluster_40 0.08 OF Compare
Fusarium graminearum HCCA Cluster_42 0.565 OF Compare
Komagataella phaffii HCCA Cluster_4 0.139 OF Compare
Komagataella phaffii HCCA Cluster_18 0.275 OF Compare
Komagataella phaffii HCCA Cluster_29 0.024 OF Compare
Komagataella phaffii HCCA Cluster_33 0.044 OF Compare
Komagataella phaffii HCCA Cluster_47 0.048 OF Compare
Komagataella phaffii HCCA Cluster_55 0.045 OF Compare
Neurospora crassa HCCA Cluster_21 0.109 OF Compare
Neurospora crassa HCCA Cluster_26 0.383 OF Compare
Neurospora crassa HCCA Cluster_60 0.206 OF Compare
Postia placenta HCCA Cluster_10 0.021 OF Compare
Postia placenta HCCA Cluster_21 0.023 OF Compare
Postia placenta HCCA Cluster_41 0.035 OF Compare
Postia placenta HCCA Cluster_66 0.038 OF Compare
Puccinia striiformis HCCA Cluster_5 0.022 OF Compare
Puccinia striiformis HCCA Cluster_21 0.054 OF Compare
Puccinia striiformis HCCA Cluster_26 0.052 OF Compare
Puccinia striiformis HCCA Cluster_31 0.043 OF Compare
Puccinia striiformis HCCA Cluster_55 0.027 OF Compare
Puccinia striiformis HCCA Cluster_77 0.09 OF Compare
Puccinia striiformis HCCA Cluster_98 0.11 OF Compare
Pyricularia oryzae HCCA Cluster_1 0.446 OF Compare
Pyricularia oryzae HCCA Cluster_25 0.019 OF Compare
Pyricularia oryzae HCCA Cluster_104 0.019 OF Compare
Pyricularia oryzae HCCA Cluster_126 0.022 OF Compare
Yarrowia lipolytica HCCA Cluster_4 0.079 OF Compare
Yarrowia lipolytica HCCA Cluster_21 0.387 OF Compare
Yarrowia lipolytica HCCA Cluster_24 0.022 OF Compare
Yarrowia lipolytica HCCA Cluster_31 0.037 OF Compare
Yarrowia lipolytica HCCA Cluster_52 0.049 OF Compare
Schizosaccharomyces pombe HCCA Cluster_10 0.029 OF Compare
Schizosaccharomyces pombe HCCA Cluster_14 0.133 OF Compare
Schizosaccharomyces pombe HCCA Cluster_32 0.048 OF Compare
Schizosaccharomyces pombe HCCA Cluster_33 0.146 OF Compare
Schizosaccharomyces pombe HCCA Cluster_41 0.076 OF Compare
Trichoderma reesei HCCA Cluster_2 0.021 OF Compare
Trichoderma reesei HCCA Cluster_21 0.364 OF Compare
Trichoderma reesei HCCA Cluster_30 0.025 OF Compare
Trichoderma reesei HCCA Cluster_40 0.021 OF Compare
Trichoderma reesei HCCA Cluster_49 0.063 OF Compare
Trichoderma reesei HCCA Cluster_73 0.06 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_5 0.033 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_32 0.184 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_56 0.018 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_58 0.206 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_81 0.051 OF Compare
Sequences (138) (download table)

InterPro Domains

GO Terms

Family Terms