Coexpression cluster: Cluster_55 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006139 nucleobase-containing compound metabolic process 27.69% (18/65) 2.5 0.0 0.0
GO:0016070 RNA metabolic process 23.08% (15/65) 2.74 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 27.69% (18/65) 2.37 0.0 0.0
GO:0034470 ncRNA processing 10.77% (7/65) 4.9 0.0 0.0
GO:0046483 heterocycle metabolic process 27.69% (18/65) 2.39 0.0 0.0
GO:0006396 RNA processing 13.85% (9/65) 4.22 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 27.69% (18/65) 2.32 0.0 0.0
GO:0090304 nucleic acid metabolic process 23.08% (15/65) 2.46 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 27.69% (18/65) 2.16 0.0 1e-06
GO:0001510 RNA methylation 4.62% (3/65) 7.34 0.0 6e-06
GO:0034660 ncRNA metabolic process 10.77% (7/65) 3.98 0.0 6e-06
GO:0006364 rRNA processing 6.15% (4/65) 5.43 2e-06 3.3e-05
GO:0016072 rRNA metabolic process 6.15% (4/65) 5.43 2e-06 3.3e-05
GO:0003676 nucleic acid binding 23.08% (15/65) 2.02 3e-06 4.5e-05
GO:0009451 RNA modification 6.15% (4/65) 5.17 4e-06 6.2e-05
GO:0043414 macromolecule methylation 4.62% (3/65) 6.34 4e-06 6.4e-05
GO:0008173 RNA methyltransferase activity 4.62% (3/65) 6.34 4e-06 6.4e-05
GO:0044237 cellular metabolic process 29.23% (19/65) 1.51 1.7e-05 0.000228
GO:0006807 nitrogen compound metabolic process 27.69% (18/65) 1.55 2.2e-05 0.000287
GO:0008168 methyltransferase activity 7.69% (5/65) 3.78 3e-05 0.000366
GO:0030488 tRNA methylation 3.08% (2/65) 7.34 3.7e-05 0.000386
GO:0043527 tRNA methyltransferase complex 3.08% (2/65) 7.34 3.7e-05 0.000386
GO:0031515 tRNA (m1A) methyltransferase complex 3.08% (2/65) 7.34 3.7e-05 0.000386
GO:0034708 methyltransferase complex 3.08% (2/65) 7.34 3.7e-05 0.000386
GO:0032259 methylation 4.62% (3/65) 5.34 4.7e-05 0.000468
GO:0016741 transferase activity, transferring one-carbon groups 7.69% (5/65) 3.62 5.1e-05 0.000486
GO:0004749 ribose phosphate diphosphokinase activity 3.08% (2/65) 6.76 0.000112 0.001025
GO:0043170 macromolecule metabolic process 23.08% (15/65) 1.54 0.000131 0.001152
GO:0140098 catalytic activity, acting on RNA 7.69% (5/65) 3.2 0.000202 0.001721
GO:0016778 diphosphotransferase activity 3.08% (2/65) 6.34 0.000223 0.001837
GO:0008033 tRNA processing 4.62% (3/65) 4.47 0.000318 0.00253
GO:0044238 primary metabolic process 27.69% (18/65) 1.23 0.000388 0.002994
GO:1990234 transferase complex 4.62% (3/65) 4.34 0.000414 0.003097
GO:0008536 Ran GTPase binding 3.08% (2/65) 5.53 0.000772 0.005607
GO:0071704 organic substance metabolic process 27.69% (18/65) 1.12 0.000984 0.006947
GO:0017016 Ras GTPase binding 3.08% (2/65) 5.17 0.001313 0.008762
GO:0031267 small GTPase binding 3.08% (2/65) 5.17 0.001313 0.008762
GO:0034654 nucleobase-containing compound biosynthetic process 10.77% (7/65) 2.04 0.001493 0.009703
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.08% (2/65) 5.02 0.001634 0.010091
GO:0006400 tRNA modification 3.08% (2/65) 5.02 0.001634 0.010091
GO:0009987 cellular process 33.85% (22/65) 0.88 0.002124 0.012796
GO:0019438 aromatic compound biosynthetic process 10.77% (7/65) 1.92 0.002354 0.013841
GO:0003723 RNA binding 6.15% (4/65) 2.8 0.002555 0.014679
GO:0018130 heterocycle biosynthetic process 10.77% (7/65) 1.87 0.002881 0.016175
GO:1902494 catalytic complex 4.62% (3/65) 3.37 0.002996 0.016445
GO:1901362 organic cyclic compound biosynthetic process 10.77% (7/65) 1.82 0.003496 0.018773
GO:0034250 positive regulation of cellular amide metabolic process 1.54% (1/65) 7.34 0.00617 0.020054
GO:0034248 regulation of cellular amide metabolic process 1.54% (1/65) 7.34 0.00617 0.020054
GO:0010608 posttranscriptional regulation of gene expression 1.54% (1/65) 7.34 0.00617 0.020054
GO:0006449 regulation of translational termination 1.54% (1/65) 7.34 0.00617 0.020054
GO:0006448 regulation of translational elongation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0006417 regulation of translation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0090730 Las1 complex 1.54% (1/65) 7.34 0.00617 0.020054
GO:0043243 positive regulation of protein-containing complex disassembly 1.54% (1/65) 7.34 0.00617 0.020054
GO:0045727 positive regulation of translation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0140102 catalytic activity, acting on a rRNA 1.54% (1/65) 7.34 0.00617 0.020054
GO:0006360 transcription by RNA polymerase I 1.54% (1/65) 7.34 0.00617 0.020054
GO:0036265 RNA (guanine-N7)-methylation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0016426 tRNA (adenine) methyltransferase activity 1.54% (1/65) 7.34 0.00617 0.020054
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 1.54% (1/65) 7.34 0.00617 0.020054
GO:0008649 rRNA methyltransferase activity 1.54% (1/65) 7.34 0.00617 0.020054
GO:0000154 rRNA modification 1.54% (1/65) 7.34 0.00617 0.020054
GO:0045905 positive regulation of translational termination 1.54% (1/65) 7.34 0.00617 0.020054
GO:0045901 positive regulation of translational elongation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0016435 rRNA (guanine) methyltransferase activity 1.54% (1/65) 7.34 0.00617 0.020054
GO:0031167 rRNA methylation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0070475 rRNA base methylation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0070476 rRNA (guanine-N7)-methylation 1.54% (1/65) 7.34 0.00617 0.020054
GO:0090079 translation regulator activity, nucleic acid binding 3.08% (2/65) 4.17 0.005382 0.025083
GO:0008135 translation factor activity, RNA binding 3.08% (2/65) 4.17 0.005382 0.025083
GO:0045182 translation regulator activity 3.08% (2/65) 4.17 0.005382 0.025083
GO:0005488 binding 35.38% (23/65) 0.75 0.005118 0.025283
GO:1901363 heterocyclic compound binding 26.15% (17/65) 0.95 0.005021 0.025311
GO:0097159 organic cyclic compound binding 26.15% (17/65) 0.95 0.005021 0.025311
GO:0000287 magnesium ion binding 3.08% (2/65) 3.88 0.007998 0.025657
GO:0006399 tRNA metabolic process 4.62% (3/65) 3.12 0.004924 0.025877
GO:0004386 helicase activity 3.08% (2/65) 4.09 0.005992 0.027406
GO:0055086 nucleobase-containing small molecule metabolic process 4.62% (3/65) 2.8 0.009147 0.028599
GO:0016740 transferase activity 12.31% (8/65) 1.43 0.009137 0.028935
GO:0051020 GTPase binding 3.08% (2/65) 3.76 0.009481 0.029272
GO:0044271 cellular nitrogen compound biosynthetic process 10.77% (7/65) 1.53 0.010452 0.031872
GO:0097659 nucleic acid-templated transcription 7.69% (5/65) 1.88 0.011362 0.033811
GO:0006351 transcription, DNA-templated 7.69% (5/65) 1.88 0.011362 0.033811
GO:1905348 endonuclease complex 1.54% (1/65) 6.34 0.012304 0.034146
GO:1902555 endoribonuclease complex 1.54% (1/65) 6.34 0.012304 0.034146
GO:0051247 positive regulation of protein metabolic process 1.54% (1/65) 6.34 0.012304 0.034146
GO:0032270 positive regulation of cellular protein metabolic process 1.54% (1/65) 6.34 0.012304 0.034146
GO:0043022 ribosome binding 1.54% (1/65) 6.34 0.012304 0.034146
GO:1902911 protein kinase complex 1.54% (1/65) 6.34 0.012304 0.034146
GO:1901293 nucleoside phosphate biosynthetic process 3.08% (2/65) 3.48 0.013674 0.037114
GO:0009165 nucleotide biosynthetic process 3.08% (2/65) 3.48 0.013674 0.037114
GO:0032774 RNA biosynthetic process 7.69% (5/65) 1.76 0.015787 0.042385
GO:0008175 tRNA methyltransferase activity 1.54% (1/65) 5.76 0.018399 0.044555
GO:0009891 positive regulation of biosynthetic process 1.54% (1/65) 5.76 0.018399 0.044555
GO:0010628 positive regulation of gene expression 1.54% (1/65) 5.76 0.018399 0.044555
GO:0008134 transcription factor binding 1.54% (1/65) 5.76 0.018399 0.044555
GO:0031328 positive regulation of cellular biosynthetic process 1.54% (1/65) 5.76 0.018399 0.044555
GO:0010557 positive regulation of macromolecule biosynthetic process 1.54% (1/65) 5.76 0.018399 0.044555
GO:0043244 regulation of protein-containing complex disassembly 1.54% (1/65) 5.76 0.018399 0.044555
GO:0017150 tRNA dihydrouridine synthase activity 1.54% (1/65) 5.76 0.018399 0.044555
GO:1905354 exoribonuclease complex 1.54% (1/65) 5.76 0.018399 0.044555
GO:0003746 translation elongation factor activity 1.54% (1/65) 5.76 0.018399 0.044555
GO:0019899 enzyme binding 3.08% (2/65) 3.21 0.01957 0.046931
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Saccharomyces cerevisiae HCCA Cluster_16 0.132 OF Compare
Saccharomyces cerevisiae HCCA Cluster_43 0.017 OF Compare
Saccharomyces cerevisiae HCCA Cluster_54 0.057 OF Compare
Saccharomyces cerevisiae HCCA Cluster_69 0.039 OF Compare
Aspergillus flavus HCCA Cluster_9 0.017 OF Compare
Aspergillus fumigatus HCCA Cluster_7 0.024 OF Compare
Aspergillus fumigatus HCCA Cluster_28 0.148 OF Compare
Aspergillus fumigatus HCCA Cluster_66 0.09 OF Compare
Aspergillus fumigatus HCCA Cluster_92 0.054 OF Compare
Aspergillus niger HCCA Cluster_22 0.088 OF Compare
Aspergillus niger HCCA Cluster_26 0.023 OF Compare
Aspergillus niger HCCA Cluster_35 0.121 OF Compare
Aspergillus niger HCCA Cluster_67 0.022 OF Compare
Aspergillus niger HCCA Cluster_84 0.099 OF Compare
Candida albicans HCCA Cluster_13 0.078 OF Compare
Candida albicans HCCA Cluster_15 0.019 OF Compare
Candida albicans HCCA Cluster_38 0.032 OF Compare
Candida albicans HCCA Cluster_41 0.078 OF Compare
Candida albicans HCCA Cluster_44 0.018 OF Compare
Candida albicans HCCA Cluster_53 0.103 OF Compare
Candida albicans HCCA Cluster_67 0.028 OF Compare
Coprinopsis cinerea HCCA Cluster_34 0.032 OF Compare
Coprinopsis cinerea HCCA Cluster_76 0.065 OF Compare
Coprinopsis cinerea HCCA Cluster_108 0.076 OF Compare
Cryptococcus neoformans HCCA Cluster_6 0.048 OF Compare
Cryptococcus neoformans HCCA Cluster_14 0.048 OF Compare
Cryptococcus neoformans HCCA Cluster_26 0.082 OF Compare
Cryptococcus neoformans HCCA Cluster_53 0.07 OF Compare
Cryptococcus neoformans HCCA Cluster_61 0.025 OF Compare
Cryptococcus neoformans HCCA Cluster_63 0.018 OF Compare
Dichomitus squalens HCCA Cluster_24 0.035 OF Compare
Fusarium graminearum HCCA Cluster_40 0.077 OF Compare
Fusarium graminearum HCCA Cluster_42 0.147 OF Compare
Fusarium graminearum HCCA Cluster_48 0.026 OF Compare
Fusarium graminearum HCCA Cluster_77 0.022 OF Compare
Fusarium graminearum HCCA Cluster_95 0.024 OF Compare
Komagataella phaffii HCCA Cluster_4 0.039 OF Compare
Komagataella phaffii HCCA Cluster_18 0.087 OF Compare
Komagataella phaffii HCCA Cluster_33 0.027 OF Compare
Komagataella phaffii HCCA Cluster_40 0.017 OF Compare
Komagataella phaffii HCCA Cluster_47 0.041 OF Compare
Komagataella phaffii HCCA Cluster_55 0.027 OF Compare
Neurospora crassa HCCA Cluster_21 0.029 OF Compare
Neurospora crassa HCCA Cluster_22 0.021 OF Compare
Neurospora crassa HCCA Cluster_26 0.128 OF Compare
Neurospora crassa HCCA Cluster_60 0.09 OF Compare
Postia placenta HCCA Cluster_14 0.019 OF Compare
Postia placenta HCCA Cluster_66 0.028 OF Compare
Puccinia striiformis HCCA Cluster_5 0.025 OF Compare
Puccinia striiformis HCCA Cluster_15 0.027 OF Compare
Puccinia striiformis HCCA Cluster_31 0.028 OF Compare
Puccinia striiformis HCCA Cluster_55 0.017 OF Compare
Puccinia striiformis HCCA Cluster_78 0.02 OF Compare
Puccinia striiformis HCCA Cluster_96 0.018 OF Compare
Puccinia striiformis HCCA Cluster_98 0.028 OF Compare
Pyricularia oryzae HCCA Cluster_1 0.11 OF Compare
Pyricularia oryzae HCCA Cluster_73 0.037 OF Compare
Pyricularia oryzae HCCA Cluster_85 0.037 OF Compare
Pyricularia oryzae HCCA Cluster_104 0.021 OF Compare
Pyricularia oryzae HCCA Cluster_114 0.018 OF Compare
Pyricularia oryzae HCCA Cluster_120 0.026 OF Compare
Pyricularia oryzae HCCA Cluster_127 0.018 OF Compare
Yarrowia lipolytica HCCA Cluster_4 0.031 OF Compare
Yarrowia lipolytica HCCA Cluster_5 0.02 OF Compare
Yarrowia lipolytica HCCA Cluster_9 0.018 OF Compare
Yarrowia lipolytica HCCA Cluster_21 0.133 OF Compare
Yarrowia lipolytica HCCA Cluster_25 0.022 OF Compare
Yarrowia lipolytica HCCA Cluster_31 0.04 OF Compare
Yarrowia lipolytica HCCA Cluster_52 0.044 OF Compare
Schizosaccharomyces pombe HCCA Cluster_14 0.032 OF Compare
Schizosaccharomyces pombe HCCA Cluster_30 0.018 OF Compare
Schizosaccharomyces pombe HCCA Cluster_33 0.091 OF Compare
Schizosaccharomyces pombe HCCA Cluster_37 0.018 OF Compare
Schizosaccharomyces pombe HCCA Cluster_41 0.029 OF Compare
Schizosaccharomyces pombe HCCA Cluster_52 0.024 OF Compare
Trichoderma reesei HCCA Cluster_21 0.096 OF Compare
Trichoderma reesei HCCA Cluster_40 0.033 OF Compare
Trichoderma reesei HCCA Cluster_49 0.046 OF Compare
Trichoderma reesei HCCA Cluster_73 0.042 OF Compare
Trichoderma reesei HCCA Cluster_85 0.034 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_5 0.034 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_32 0.072 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_56 0.046 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_58 0.076 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_59 0.023 OF Compare
Sclerotinia sclerotiorum HCCA Cluster_81 0.027 OF Compare
Sequences (65) (download table)

InterPro Domains

GO Terms

Family Terms