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  5. SPAC23H4.14.1

SPAC23H4.14.1


Description : guanyl-nucleotide exchange factor, HOPS complex subunit Vam6 (predicted) [Source:PomBase;Acc:SPAC23H4.14]


Gene families : OG_03_0003283 (OF) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC23H4.14.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AFR98822 No alias hypothetical protein;Vacuolar sorting protein 39 domain... 0.05 OF
CAG83012 No alias Vacuolar sorting protein 39/Transforming growth factor... 0.05 OF
CAK48112 No alias Vacuolar sorting protein 39 domain 1 0.05 OF
CBF71321 No alias AvaB protein 0.03 OF
EAA27006 No alias Citron homology (CNH) domain 0.06 OF
EAL86893 No alias vacuolar morphogenesis protein AvaB, putative 0.1 OF
EAU85277 No alias rab guanyl-nucleotide exchange factor 0.03 OF
EDN92326 No alias Citron homology (CNH) domain 0.03 OF
ESU08776 No alias Citron homology (CNH) domain 0.06 OF
KHC81315 No alias hypothetical protein;Vacuolar sorting protein 39 domain... 0.04 OF
POV99157 No alias Vacuolar sorting protein 39/Transforming growth factor... 0.03 OF
YDL077C No alias Guanine nucleotide exchange factor for the GTPase Gtr1p;... 0.06 OF

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 785 892
IPR000547 Clathrin_H-chain/VPS_repeat 627 756
IPR001180 CNH_dom 70 283
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 492 602
No external refs found!