Description : rhamnogalacturonase B precursor

Gene families : OG_03_0006740 (OF) Phylogenetic Tree(s): OG0006740_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: ESU06252
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
CAK46452 No alias Polysaccharide lyase family 4, domain III 0.09 OF
EAL84527 No alias rhamnogalacturonase B, putative 0.02 OF

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029411 RG-lyase_III 375 538
IPR015364 RhgB_N 20 279
IPR029413 RG-lyase_II 285 358
No external refs found!