ESU06252

Description : rhamnogalacturonase B precursor

Gene families : OG_03_0006740 (OF) Phylogenetic Tree(s): OG0006740_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ESU06252
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method	Actions
CAK46452	No alias	Polysaccharide lyase family 4, domain III	0.09	OF
EAL84527	No alias	rhamnogalacturonase B, putative	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEA	Interproscan
MF	GO:0030246	carbohydrate binding	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR029411	RG-lyase_III	375	538
IPR015364	RhgB_N	20	279
IPR029413	RG-lyase_II	285	358

External Links

No external refs found!