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  5. YPR088C

YPR088C


Description : Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain [Source:SGD;Acc:S000006292]


Gene families : OG_03_0001483 (OF) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YPR088C
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
CAG77773 No alias Signal recognition particle, SRP54 subunit, GTPase domain 0.03 OF
EAL85919 No alias signal recognition particle protein SRP54 0.09 OF
EAU88500 No alias signal recognition particle protein 0.02 OF
EDO01291 No alias Signal recognition particle SRP54, helical bundle 0.03 OF
KHC71088 No alias signal recognition particle protein SRP54;Signal peptide... 0.08 OF
MGG_05977T0 No alias Signal recognition particle protein... 0.02 OF
POV94578 No alias Signal recognition particle, SRP54 subunit, GTPase... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
CC GO:0048500 signal recognition particle IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013822 Signal_recog_particl_SRP54_hlx 6 88
IPR000897 SRP54_GTPase_dom 110 304
IPR004125 Signal_recog_particle_SRP54_M 335 436
No external refs found!