YMR309C

Description : eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3); involved in the assembly of preinitiation complex and start codon selection; eIF3 is also involved in programmed stop codon readthrough [Source:SGD;Acc:S000004926]

Gene families : OG_03_0001262 (OF) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YMR309C
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AFR95378	No alias	translation initiation factor 3 subunit C;Eukaryotic...	0.08	OF
AOA68298	No alias	Proteasome component (PCI) domain	0.12	OF
CAG81355	No alias	Eukaryotic translation initiation factor 3 subunit C,...	0.09	OF
CAK41902	No alias	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	0.03	OF
CAK46444	No alias	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	0.1	OF
CBF79072	No alias	Eukaryotic translation initiation factor 3 subunit C	0.07	OF
EAA33716	No alias	Eukaryotic translation initiation factor 3 subunit C,...	0.11	OF
EAL84535	No alias	eukaryotic translation initiation factor 3 subunit...	0.15	OF
EDN90693	No alias	Eukaryotic translation initiation factor 3 subunit C,...	0.09	OF
EED78775	No alias	Eukaryotic translation initiation factor 3 subunit C,...	0.02	OF
EFI28197	No alias	eukaryotic translation initiation factor 3...	0.04	OF
EGR48815	No alias	Proteasome component (PCI) domain	0.15	OF
ESU07996	No alias	Eukaryotic translation initiation factor 3 subunit C,...	0.1	OF
KHC78096	No alias	eukaryotic translation initiation factor 3 subunit...	0.12	OF
MGG_16895T0	No alias	Eukaryotic translation initiation factor 3 subunit C...	0.06	OF
POV93922	No alias	Proteasome component (PCI) domain;Eukaryotic translation...	0.09	OF
SPAC4A8.16c.1	No alias	translation initiation factor eIF3c...	0.12	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	Interproscan
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0031369	translation initiation factor binding	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000717	PCI_dom	651	780
IPR008905	EIF3C_N_dom	243	639
IPR008905	EIF3C_N_dom	93	243

External Links

No external refs found!

YMR309C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation