Description : DNA ligase Cdc9, putative

Gene families : OG_03_0003578 (OF) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EAL93197
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
CAG77648 No alias DNA ligase, ATP-dependent, C-terminal 0.03 OF
CAK97160 No alias ATP dependent DNA ligase C terminal region 0.06 OF
CBF70249 No alias DNA ligase 0.04 OF
EAA27885 No alias DNA ligase, ATP-dependent, C-terminal 0.05 OF
ESU11415 No alias DNA ligase 0.07 OF
MGG_06370T0 No alias DNA ligase 1 [Source:UniProtKB/TrEMBL;Acc:G4N7T1] 0.04 OF
POW11383 No alias DNA ligase, ATP-dependent, N-terminal;DNA ligase,... 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012310 DNA_ligase_ATP-dep_cent 525 730
IPR012309 DNA_ligase_ATP-dep_C 755 872
IPR012308 DNA_ligase_ATP-dep_N 288 458
No external refs found!