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EDO00099


Description : DNA-directed RNA polymerase, insert domain


Gene families : OG_03_0002740 (OF) Phylogenetic Tree(s): OG0002740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDO00099
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AFR94965 No alias DNA-directed RNA polymerase I and III subunit RPAC1;RNA... 0.22 OF
AOA70237 No alias DNA-directed RNA polymerase, RpoA/D/Rpb3-type 0.09 OF
CAG79929 No alias DNA-directed RNA polymerase, insert domain 0.04 OF
CAK47675 No alias RNA polymerase Rpb3/Rpb11 dimerisation domain 0.24 OF
CBF86802 No alias DNA-directed RNA polymerase I and III subunit Rpc40, putative 0.29 OF
EAA36428 No alias DNA-directed RNA polymerase, insert domain 0.32 OF
EAL93667 No alias DNA-directed RNA polymerase I and III subunit Rpc40, putative 0.16 OF
EAU91821 No alias RNA polymerase subunit 0.04 OF
EGR50760 No alias DNA-directed RNA polymerase, RpoA/D/Rpb3-type 0.24 OF
EJF57331 No alias RNA polymerase Rpb3/RpoA insert domain 0.08 OF
ESU05539 No alias DNA-directed RNA polymerases I and III 40 kDa polypeptide 0.09 OF
KHC81579 No alias DNA-directed RNA polymerase I and III subunit RPAC1;RNA... 0.11 OF
MGG_09284T0 No alias DNA-directed RNA polymerase I and III subunit RPAC1... 0.1 OF
POW14778 No alias DNA-directed RNA polymerase, insert domain;DNA-directed... 0.05 OF
SPBC1289.07c.1 No alias DNA-directed RNA polymerase I and III subunit Rpc40... 0.08 OF
YPR110C No alias RNA polymerase subunit AC40; common to RNA polymerase I... 0.12 OF

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011263 DNA-dir_RNA_pol_RpoA/D/Rpb3 75 375
IPR011262 DNA-dir_RNA_pol_insert 108 253
No external refs found!