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  5. EGR47390

EGR47390


Description : RNA polymerase, beta subunit, protrusion


Gene families : OG_03_0002495 (OF) Phylogenetic Tree(s): OG0002495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EGR47390
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AGV14332 No alias DNA-directed RNA polymerase II subunit RPB2, variant;RNA... 0.01 OF
CAG80564 No alias RNA polymerase Rpb2, domain 2 0.02 OF
CAK41002 No alias RNA polymerase Rpb2, domain 6 0.02 OF
EAA27870 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 0.02 OF
EAL84702 No alias DNA-dependent RNA polymerase II RPB140 0.03 OF
EDN91482 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 0.02 OF
ESU08125 No alias DNA-directed RNA polymerase 0.02 OF
MGG_04714T0 No alias DNA-directed RNA polymerase II subunit RPB2... 0.02 OF
POW05214 No alias RNA polymerase, beta subunit, protrusion;DNA-directed... 0.01 OF
YOR151C No alias RNA polymerase II second largest subunit B150; part of... 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007641 RNA_pol_Rpb2_7 1162 1254
IPR007645 RNA_pol_Rpb2_3 509 573
IPR007120 DNA-dir_RNAP_su2_dom 788 1160
IPR007642 RNA_pol_Rpb2_2 243 435
IPR007647 RNA_pol_Rpb2_5 710 781
IPR007646 RNA_pol_Rpb2_4 608 669
IPR007644 RNA_pol_bsu_protrusion 37 480
No external refs found!