Description : DNA ligase, ATP-dependent, C-terminal

Gene families : OG_03_0002010 (OF) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CAG81303
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
CBF90206 No alias DNA ligase 4 0.02 OF
EED85575 No alias BRCT domain 0.02 OF
EFI27358 No alias DNA ligase IV 0.02 OF
ESU08977 No alias DNA ligase, ATP-dependent, C-terminal 0.03 OF
SPCC1183.05c.1 No alias DNA repair ligase Lig4 [Source:PomBase;Acc:SPCC1183.05c] 0.03 OF
YOR005C No alias DNA ligase required for nonhomologous end-joining... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012308 DNA_ligase_ATP-dep_N 64 239
IPR012310 DNA_ligase_ATP-dep_cent 297 500
IPR001357 BRCT_dom 703 790
IPR012309 DNA_ligase_ATP-dep_C 526 637
No external refs found!