MGG_01158T0


Description : DNA-directed RNA polymerase I subunit RPA1 [Source:UniProtKB/TrEMBL;Acc:G4NBX7]


Gene families : OG_03_0002856 (OF) Phylogenetic Tree(s): OG0002856_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MGG_01158T0
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AFR94954 No alias DNA-directed RNA polymerase I subunit RPA1;RNA... 0.02 OF
AOA67914 No alias RNA polymerase Rpb1, domain 5 0.02 OF
CAG78195 No alias RNA polymerase Rpb1, domain 1 0.07 OF
CAK39952 No alias RNA polymerase Rpb1, domain 2 0.06 OF
EAA26770 No alias RNA polymerase Rpb1, domain 4 0.03 OF
EAL90722 No alias DNA-directed RNA polymerase I subunit (Rpa190), putative 0.03 OF
EDN93737 No alias RNA polymerase, alpha subunit 0.06 OF
EFI27675 No alias RNA polymerase I largest subunit 0.03 OF
EGR44276 No alias RNA polymerase Rpb1, domain 1 0.03 OF
EJF56609 No alias RNA polymerase Rpb1, domain 3 0.03 OF
ESU08827 No alias RNA polymerase Rpb1, domain 1 0.05 OF
KHC83811 No alias DNA-directed RNA polymerase I subunit RPA1;"RNA... 0.05 OF
POW13373 No alias RNA polymerase Rpb1, domain 5;RNA polymerase Rpb1,... 0.03 OF
SPBC4C3.05c.1 No alias DNA-directed RNA polymerase I complex large subunit Nuc1... 0.02 OF
YOR341W No alias RNA polymerase I largest subunit A190 [Source:SGD;Acc:S000005868] 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007083 RNA_pol_Rpb1_4 909 1000
IPR000722 RNA_pol_asu 489 667
IPR007066 RNA_pol_Rpb1_3 672 849
IPR007081 RNA_pol_Rpb1_5 1007 1654
IPR007080 RNA_pol_Rpb1_1 10 487
No external refs found!