POV98842


Description : Coatomer, alpha subunit, C-terminal;Coatomer, WD associated region;WD40 repeat


Gene families : OG_03_0002654 (OF) Phylogenetic Tree(s): OG0002654_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: POV98842
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AFR96778 No alias coatomer protein complex, subunit alpha (xenin);Coatomer... 0.03 OF
AOA65926 No alias Coatomer, WD associated region 0.04 OF
CAG79756 No alias WD40 repeat 0.02 OF
CAL00470 No alias Coatomer WD associated region 0.03 OF
CBF83542 No alias Coatomer alpha subunit 0.03 OF
EAA28645 No alias WD40 repeat 0.02 OF
EAL92694 No alias Coatomer subunit alpha, putative 0.04 OF
EAU89454 No alias coatomer subunit alpha-2 0.05 OF
EDN95254 No alias Coatomer, alpha subunit, C-terminal 0.06 OF
EGR48167 No alias WD40 repeat 0.06 OF
EJF57940 No alias Coatomer (COPI) alpha subunit C-terminus 0.02 OF
ESU14274 No alias coatomer subunit alpha 0.01 OF
KHC80117 No alias coatomer protein complex, subunit alpha (xenin);Coatomer... 0.05 OF
MGG_03511T0 No alias Coatomer alpha subunit [Source:UniProtKB/TrEMBL;Acc:G4N7Y7] 0.08 OF
SPBPJ4664.04.1 No alias coatomer alpha subunit Cop1 (predicted)... 0.02 OF
YDL145C No alias Alpha subunit of COPI vesicle coatomer complex; complex... 0.08 OF

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010714 Coatomer_asu_C 826 1226
IPR006692 Coatomer_WD-assoc_reg 347 774
IPR001680 WD40_repeat 94 131
IPR001680 WD40_repeat 247 282
IPR001680 WD40_repeat 135 173
IPR001680 WD40_repeat 56 89
No external refs found!