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  5. EAA27335

EAA27335


Description : RNA polymerase Rpb1, domain 5


Gene families : OG_03_0000411 (OF) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EAA27335
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AFR96255 No alias DNA-directed RNA polymerase III subunit RPC1;RNA... 0.08 OF
AOA70277 No alias RNA polymerase Rpb1, domain 5 0.06 OF
CAG82462 No alias RNA polymerase Rpb1, domain 5 0.14 OF
CAK37321 No alias RNA polymerase Rpb1 C-terminal repeat 0.03 OF
CAK96852 No alias RNA polymerase Rpb1, domain 3 0.07 OF
CBF87003 No alias hypothetical protein similar to RNA polymerase III 0.04 OF
EAL92151 No alias DNA-directed RNA polymerase III largest subunit, putative 0.14 OF
EED85755 No alias RNA polymerase Rpb1, domain 7 0.02 OF
EGR49933 No alias RNA polymerase Rpb1, domain 5 0.09 OF
EJF58827 No alias RNA polymerase Rpb1, domain 3 0.01 OF
ESU16499 No alias DNA-directed RNA polymerase III largest subunit 0.07 OF
KHC69799 No alias DNA-directed RNA polymerase II subunit RPB1;"RNA... 0.02 OF
KHC76777 No alias DNA-directed RNA polymerase III subunit RPC1;"RNA... 0.04 OF
MGG_04477T0 No alias DNA-directed RNA polymerase III subunit RPC1... 0.06 OF
MGG_04652T0 No alias DNA-directed RNA polymerase II largest subunit... 0.02 OF
POW02026 No alias RNA polymerase, alpha subunit;RNA polymerase Rpb1,... 0.02 OF
POW18023 No alias RNA polymerase Rpb1, domain 1;RNA polymerase Rpb1,... 0.06 OF
SPBC651.08c.1 No alias DNA-directed RNA polymerase III complex large subunit... 0.03 OF
YOR116C No alias RNA polymerase III largest subunit C160; part of core... 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 367 537
IPR007083 RNA_pol_Rpb1_4 744 846
IPR007066 RNA_pol_Rpb1_3 540 715
IPR007080 RNA_pol_Rpb1_1 19 365
IPR007081 RNA_pol_Rpb1_5 853 1419
No external refs found!