AFR95648

Description : ubiquitin-protein ligase;Putative zinc finger in N-recognin (UBR box);RNA polymerase II elongation factor ELL

Gene families : OG_03_0001170 (OF) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR95648
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AOA65762	No alias	Zinc finger, RING-type	0.06	OF
CAG82694	No alias	Zinc finger, UBR-type	0.02	OF
CAK45895	No alias	Putative zinc finger in N-recognin (UBR box)	0.03	OF
CBF75084	No alias	ubiquitin-protein ligase E3 component	0.07	OF
EAL88693	No alias	ubiquitin-protein ligase E3 component (UBR1), putative	0.04	OF
EAU93649	No alias	Zinc finger, UBR-type	0.03	OF
EED48574	No alias	ubiquitin-protein ligase E3 component (UBR1), putative	0.03	OF
EED85756	No alias	No description available	0.02	OF
EGR47757	No alias	Adaptor protein ClpS, core	0.12	OF
EJF55934	No alias	ATP-dependent Clp protease adaptor protein ClpS	0.07	OF
ESU06482	No alias	Adaptor protein ClpS, core	0.11	OF
KHC77585	No alias	hypothetical protein;Putative zinc finger in N-recognin (UBR box)	0.07	OF
KHC77586	No alias	E3 ubiquitin-protein ligase UBR1;ATP-dependent Clp...	0.08	OF
MGG_13171T0	No alias	E3 ubiquitin-protein ligase ubr1...	0.05	OF
SPAC15A10.11.1	No alias	UBR ubiquitin-protein ligase E3 Ubr11...	0.1	OF
SPBC19C7.02.1	No alias	N-end-recognizing protein, UBR ubiquitin-protein ligase...	0.07	OF
YLR024C	No alias	Cytoplasmic ubiquitin-protein ligase (E3); component of...	0.06	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription, elongation	None	Extended
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
CC	GO:0008023	transcription elongation factor complex	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003126	Znf_UBR	124	194
IPR019464	ELL_N	891	968

External Links

No external refs found!

AFR95648

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation