AFR95001

Description : replication factor A1;Replication protein A OB domain;OB-fold nucleic acid binding domain;Replication factor-A C terminal domain;Replication factor-A protein 1, N-terminal domain

Gene families : OG_03_0002782 (OF) Phylogenetic Tree(s): OG0002782_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR95001
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AOA66855	No alias	Replication factor-A protein 1, N-terminal	0.07	OF
CAG79583	No alias	Replication factor A, C-terminal	0.03	OF
CAK37984	No alias	Replication protein A OB domain	0.04	OF
CBF79351	No alias	subunit of heterotrimeric Replication Factor	0.05	OF
EAA32097	No alias	Replication factor-A protein 1, N-terminal	0.07	OF
EAL87723	No alias	replication protein A 70 kDa DNA-binding subunit	0.07	OF
EDN92310	No alias	Replication factor A, C-terminal	0.03	OF
EGR53134	No alias	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	0.04	OF
ESU16798	No alias	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	0.05	OF
KHC81114	No alias	replication factor-a protein 1 (rpa1);Replication...	0.07	OF
MGG_00685T0	No alias	Replication factor-A protein 1...	0.02	OF
POW04095	No alias	OB-fold nucleic acid binding domain, AA-tRNA...	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR031657	REPA_OB_2	294	391
IPR004365	NA-bd_OB_tRNA	187	271
IPR013955	Rep_factor-A_C	458	604
IPR007199	Rep_factor-A_N	7	104

External Links

No external refs found!

AFR95001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation