AFR93919

Description : exosome complex exonuclease RRP6;3'-5' exonuclease;PMC2NT (NUC016) domain;HRDC domain

Gene families : OG_03_0003746 (OF) Phylogenetic Tree(s): OG0003746_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR93919
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
AOA66858	No alias	HRDC domain	0.06	OF
CAG79122	No alias	HRDC domain	0.08	OF
CAK42852	No alias	PMC2NT (NUC016) domain	0.13	OF
CBF76306	No alias	exosome complex exonuclease Rrp6, putative	0.02	OF
EAA30664	No alias	Exosome-associated factor Rrp6, N-terminal	0.1	OF
EAL92593	No alias	exosome complex exonuclease Rrp6, putative	0.16	OF
EED79945	No alias	3'-5' exonuclease domain	0.03	OF
EGR49168	No alias	HRDC domain	0.16	OF
EJF62098	No alias	PMC2NT (NUC016) domain	0.03	OF
ESU12093	No alias	3'-5' exonuclease domain	0.14	OF
KHC83281	No alias	exosome complex exonuclease RRP6;3'-5'...	0.15	OF
MGG_00896T0	No alias	Exosome complex exonuclease Rrp...	0.15	OF
SPAC1F3.01.1	No alias	exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)...	0.06	OF
YOR001W	No alias	Nuclear exosome exonuclease component; has 3'-5'...	0.12	OF

Type	GO Term	Name	Evidence	Source
CC	GO:0000176	nuclear exosome (RNase complex)	IEA	Interproscan
CC	GO:0000178	exosome (RNase complex)	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905354	exoribonuclease complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	277	445
IPR012588	Exosome-assoc_fac_Rrp6_N	32	137
IPR002121	HRDC_dom	524	588

External Links

No external refs found!

AFR93919

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation