Description : ATP dependent helicase

Gene families : OG_03_0000143 (OF) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EAU88694
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
CAG81409 No alias RNA helicase UPF1, UPF2-interacting domain 0.03 OF
CAK45574 No alias RNA helicase (UPF2 interacting domain) 0.03 OF
EAA31997 No alias DNA2/NAM7 helicase, AAA domain 0.04 OF
EAL90638 No alias regulator of nonsense transcripts, putative 0.04 OF
EDN91568 No alias DNA2/NAM7 helicase-like, AAA domain 0.03 OF
EFI28211 No alias DNA2/NAM7 helicase-like, AAA domain 0.03 OF
ESU16575 No alias ATP-dependent helicase NAM7 0.03 OF
KHC83466 No alias hypothetical protein;AAA domain 0.02 OF
MGG_00976T0 No alias Regulator-nonsense transcripts 1... 0.02 OF
SPAC16C9.06c.1 No alias ATP-dependent RNA helicase Upf1 [Source:PomBase;Acc:SPAC16C9.06c] 0.02 OF
YER176W No alias DNA dependent ATPase/DNA helicase; helicase belonging to... 0.03 OF
YMR080C No alias ATP-dependent RNA helicase of the SFI superfamily;... 0.04 OF

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_AAA 654 849
IPR041677 DNA2/NAM7_AAA_11 547 646
IPR018999 RNA-helicase_UPF1_UPF2-interct 95 244
IPR040812 DUF5599 296 387
IPR006935 Helicase/UvrB_N 444 536
No external refs found!