KHC84003

Description : pre-mRNA-processing factor 6;"PRP1 splicing factor, N-terminal"

Gene families : OG_03_0001682 (OF) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KHC84003
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
CAK48894	No alias	Tetratricopeptide repeat	0.03	OF
CBF79397	No alias	mRNA splicing factor	0.02	OF
EDO02532	No alias	Tetratricopeptide repeat	0.04	OF
EED48797	No alias	mRNA splicing factor (Prp1/Zer1), putative	0.02	OF
EGR45600	No alias	Tetratricopeptide repeat	0.03	OF
ESA42407	No alias	Tetratricopeptide repeat	0.03	OF
ESU16930	No alias	PRP1 splicing factor, N-terminal	0.07	OF
MGG_07213T0	No alias	Pre-mRNA-splicing factor prp1...	0.03	OF
POV96798	No alias	PRP1 splicing factor, N-terminal	0.02	OF
SPBC6B1.07.1	No alias	U4/U6 x U5 tri-snRNP complex subunit Prp1...	0.06	OF
YBR055C	No alias	Splicing factor; component of the U4/U6-U5 snRNP complex...	0.05	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010491	PRP1_N	11	151

External Links

No external refs found!