Description : Subunit of the SAGA transcriptional regulatory complex; involved in maintaining the integrity of the complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay [Source:SGD;Acc:S000005508]
Gene families : OG_03_0002067 (OF) Phylogenetic Tree(s): OG0002067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: YOL148C | |
Cluster | HCCA: Cluster_63 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
CAG81723 | No alias | Transcription factor Spt20 | 0.07 | OF | |
CAK37230 | No alias | No description available | 0.02 | OF | |
CBF88411 | No alias | ORF Fragment | 0.02 | OF | |
EAL90987 | No alias | conserved hypothetical protein | 0.01 | OF | |
EDN91093 | No alias | No description available | 0.03 | OF | |
EGR48001 | No alias | Transcription factor Spt20 | 0.04 | OF | |
ESU06904 | No alias | Transcription factor Spt20 | 0.04 | OF | |
KHC83317 | No alias | transcription factor SPT20;Spt20 family | 0.05 | OF | |
SPAC4D7.10c.1 | No alias | SAGA complex subunit Spt20 [Source:PomBase;Acc:SPAC4D7.10c] | 0.03 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000124 | SAGA complex | IEA | Interproscan |
MF | GO:0003712 | transcription coregulator activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021950 | Spt20 | 123 | 342 |
No external refs found! |