Description : hypothetical protein;AAA domain;RNA helicase (UPF2 interacting domain);Domain of unknown function (DUF5599)

Gene families : OG_03_0000143 (OF) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KHC74964
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AFR98003 No alias ATP-dependent helicase;Domain of unknown function... 0.03 OF
CAK45574 No alias RNA helicase (UPF2 interacting domain) 0.02 OF
EAA31997 No alias DNA2/NAM7 helicase, AAA domain 0.03 OF
EAL90638 No alias regulator of nonsense transcripts, putative 0.05 OF
EDN91568 No alias DNA2/NAM7 helicase-like, AAA domain 0.03 OF
ESU15469 No alias DNA2/NAM7 helicase-like, AAA domain 0.03 OF
ESU16575 No alias ATP-dependent helicase NAM7 0.05 OF
POW07607 No alias DNA2/NAM7 helicase, AAA domain;DNA2/NAM7 helicase-like,... 0.01 OF
SPCC737.07c.1 No alias DNA polymerase alpha-associated DNA helicase A... 0.02 OF
YMR080C No alias ATP-dependent RNA helicase of the SFI superfamily;... 0.05 OF

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 441 543
IPR041677 DNA2/NAM7_AAA_11 552 641
IPR041679 DNA2/NAM7-like_AAA 649 847
IPR018999 RNA-helicase_UPF1_UPF2-interct 91 239
IPR040812 DUF5599 292 384
No external refs found!