YNL124W

Description : RNA-binding protein required for the assembly of box H/ACA snoRNPs; thus required for pre-rRNA processing; forms a complex with Shq1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; similar to Gar1p [Source:SGD;Acc:S000005068]

Gene families : OG_03_0001414 (OF) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YNL124W
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AFR95380	No alias	H/ACA ribonucleoprotein complex non-core subunit...	0.02	OF
CAK39950	No alias	Gar1/Naf1 RNA binding region	0.02	OF
CBF88898	No alias	snoRNP assembly factor Naf1, putative	0.02	OF
EAL90720	No alias	snoRNP assembly factor Naf1, putative	0.04	OF
EGR51431	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.02	OF
ESU11179	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.02	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007504	H/ACA_rnp_Gar1/Naf1	122	270

External Links

No external refs found!

YNL124W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation