YNL062C

Description : Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p; required for the modification of the adenine at position 58 in tRNAs, especially tRNAi-Met; first identified as a negative regulator of GCN4 expression [Source:SGD;Acc:S000005006]

Gene families : OG_03_0001574 (OF) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YNL062C
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AFR97880	No alias	tRNA (adenine-N(1)-)-methyltransferase non-catalytic...	0.08	OF
CAG82972	No alias	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic...	0.22	OF
CAK42773	No alias	Gcd10p family	0.04	OF
CBF73815	No alias	eukaryotic translation initiation factor 3, gamma...	0.24	OF
EAA30446	No alias	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic...	0.22	OF
EAL86119	No alias	eukaryotic translation initiation factor 3, gamma...	0.06	OF
EAU92549	No alias	eukaryotic translation initiation factor 3 62 kDa subunit	0.03	OF
EDN96907	No alias	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic...	0.06	OF
ESU06936	No alias	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic...	0.17	OF
KHC71362	No alias	tRNA (adenine-N(1)-)-methyltransferase non-catalytic...	0.3	OF
MGG_00308T0	No alias	Putative uncharacterized protein...	0.17	OF
SPBC800.08.1	No alias	tRNA (m1A) methyltransferase Gcd10 (predicted)...	0.06	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0030488	tRNA methylation	IEA	Interproscan
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEA	Interproscan
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
CC	GO:0034708	methyltransferase complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
CC	GO:0043527	tRNA methyltransferase complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR017423	TRM6	6	329

External Links

No external refs found!

YNL062C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation