YML080W

Description : Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus3p, and Dus4p; modifies pre-tRNA(Phe) at U17 [Source:SGD;Acc:S000004545]

Gene families : OG_03_0001324 (OF) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YML080W
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AFR92562	No alias	tRNA-dihydrouridine synthase 1;Dihydrouridine synthase (Dus)	0.07	OF
AOA66741	No alias	tRNA-dihydrouridine synthase	0.12	OF
CAG83438	No alias	tRNA-dihydrouridine synthase	0.15	OF
CAK37250	No alias	Dihydrouridine synthase (Dus)	0.04	OF
CBF88446	No alias	dihydrouridine synthase family protein, putative	0.07	OF
EAL90982	No alias	dihydrouridine synthase family protein, putative	0.13	OF
EAU92129	No alias	tRNA-dihydrouridine synthase 1	0.03	OF
EDN97788	No alias	tRNA-dihydrouridine synthase	0.02	OF
EED83713	No alias	tRNA-dihydrouridine synthase	0.03	OF
EGR50874	No alias	tRNA-dihydrouridine synthase	0.06	OF
ESU13438	No alias	tRNA-dihydrouridine synthase 1	0.1	OF
KHC81976	No alias	tRNA-dihydrouridine synthase 1;Dihydrouridine synthase (Dus)	0.2	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001269	tRNA_hU_synthase	32	344

External Links

No external refs found!

YML080W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation