CAK39496

Description : Exosome complex exonuclease Rrp40 N-terminal domain

Gene families : OG_03_0002431 (OF) Phylogenetic Tree(s): OG0002431_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAK39496
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
CAG80318	No alias	K Homology domain, type 1	0.03	OF
CBF77139	No alias	exosome complex exonuclease Rrp40, putative	0.14	OF
EAL87331	No alias	exosome complex exonuclease Rrp40, putative	0.04	OF
EGR49807	No alias	Exosome complex exonuclease Rrp40, N-terminal	0.03	OF
ESU14672	No alias	Exosome complex exonuclease Rrp40, N-terminal	0.05	OF
KHC82904	No alias	exosome complex component RRP40;Exosome complex...	0.07	OF
SPAC22A12.12c.1	No alias	exosome subunit Rrp40 [Source:PomBase;Acc:SPAC22A12.12c]	0.02	OF
YOL142W	No alias	Exosome non-catalytic core component; involved in 3'-5'...	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041054	Rrp40_N	19	78
IPR004088	KH_dom_type_1	173	236

External Links

No external refs found!