YLR222C


Description : Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA [Source:SGD;Acc:S000004212]


Gene families : OG_03_0002459 (OF) Phylogenetic Tree(s): OG0002459_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLR222C
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR93710 No alias U3 small nucleolar RNA-associated protein 13;WD domain,... 0.26 OF
AOA68420 No alias Small-subunit processome, Utp13 0.16 OF
CAG80271 No alias WD40 repeat 0.32 OF
CAL00677 No alias WD domain, G-beta repeat 0.32 OF
CBF77475 No alias small nucleolar ribonucleoprotein complex subunit, putative 0.12 OF
EAA32119 No alias WD40 repeat 0.32 OF
EAL90033 No alias small nucleolar ribonucleoprotein complex subunit, putative 0.33 OF
EAU92527 No alias U3 small nucleolar RNA-associated protein 0.12 OF
EDO00229 No alias WD40 repeat 0.23 OF
EGR52575 No alias Small-subunit processome, Utp13 0.31 OF
ESU12932 No alias WD40 repeat 0.25 OF
KHC75155 No alias U3 small nucleolar RNA-associated protein 13;"WD domain,... 0.36 OF
MGG_08178T0 No alias U3 small nucleolar RNA-associated protein 13... 0.22 OF
POW15337 No alias WD40 repeat 0.16 OF
SPCC16A11.02.1 No alias U3 snoRNP-associated protein Utp13 (predicted)... 0.1 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 383 415
IPR001680 WD40_repeat 607 645
IPR001680 WD40_repeat 137 176
IPR001680 WD40_repeat 527 561
IPR001680 WD40_repeat 180 224
IPR001680 WD40_repeat 567 603
IPR001680 WD40_repeat 488 519
IPR013934 SSU_processome_Utp13 666 813
No external refs found!