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  5. YKR094C

YKR094C


Description : Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802]


Gene families : OG_03_0000304 (OF) Phylogenetic Tree(s): OG0000304_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: YKR094C
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AFR92505 No alias polyubiquitin;Ribosomal L40e family;Ubiquitin family 0.52 OF
AFR94963 No alias small subunit ribosomal protein S27Ae;Ribosomal protein... 0.49 OF
AOA67253 No alias Ubiquitin-like domain 0.38 OF
AOA68626 No alias Ubiquitin-like domain 0.39 OF
CAG77982 No alias Ubiquitin-like domain 0.24 OF
CAG78029 No alias Ribosomal protein S27a 0.05 OF
CAK43654 No alias Ubiquitin family 0.36 OF
CAK44245 No alias Ubiquitin family 0.43 OF
CBF76581 No alias Putative uncharacterized proteinUBI1 0.49 OF
EAL92455 No alias ubiquitin (UbiC), putative 0.55 OF
EAU90492 No alias ubiquitin 0.3 OF
EAU92224 No alias ubiquitin-carboxy extension protein fusion 0.19 OF
EBA27335 No alias ubiquitin UbiA, putative 0.42 OF
EDN95160 No alias Ribosomal protein S27a 0.42 OF
EDN96945 No alias Ubiquitin-like domain 0.31 OF
EED83182 No alias Ubiquitin-like domain 0.04 OF
EED85602 No alias Ubiquitin-like domain 0.44 OF
EGR45214 No alias Ubiquitin-like domain 0.21 OF
EGR47867 No alias Ubiquitin-like domain 0.11 OF
EJF59025 No alias Ubiquitin family 0.19 OF
ESA41890 No alias Ubiquitin-like domain 0.41 OF
ESA41891 No alias Ubiquitin-like domain 0.41 OF
ESA42315 No alias Ribosomal protein L40e 0.03 OF
ESA42316 No alias Ribosomal protein L40e 0.03 OF
ESU07327 No alias Ubiquitin-like domain 0.51 OF
ESU17811 No alias Ribosomal protein S27a 0.47 OF
KHC76789 No alias polyubiquitin;Ribosomal protein S27a;Ubiquitin family 0.51 OF
MGG_06044T0 No alias Ubiquitin-60S ribosomal protein L40... 0.19 OF
MGG_07928T0 No alias Ubiquitin-40S ribosomal protein S27a... 0.04 OF
POW04691 No alias Ubiquitin-like domain;Ribosomal protein S27a 0.47 OF
SPAC11G7.04.1 No alias ribosomal-ubiquitin fusion protein Ubi1 (predicted)... 0.28 OF
SPAC1805.12c.1 No alias ribosomal-ubiquitin fusion protein Ubi2... 0.35 OF
SPAC589.10c.1 No alias ribosomal-ubiquitin fusion protein Ubi5 (predicted)... 0.3 OF
SPAC6G10.11c.1 No alias ribosomal-ubiquitin fusion protein Ubi3 (predicted)... 0.19 OF

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR001975 Ribosomal_L40e 78 127
No external refs found!