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  5. YKR002W

YKR002W


Description : Poly(A) polymerase; one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs; required for gene looping [Source:SGD;Acc:S000001710]


Gene families : OG_03_0001335 (OF) Phylogenetic Tree(s): OG0001335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YKR002W
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
CAK44143 No alias Poly(A) polymerase predicted RNA binding domain 0.02 OF
EAL90864 No alias poly(A) polymerase Pap 0.02 OF
EAU84193 No alias polymerase 0.02 OF
EDN97684 No alias Poly(A) polymerase, RNA-binding domain 0.03 OF
EED82659 No alias Poly(A) polymerase, RNA-binding domain 0.04 OF
EJF62333 No alias Poly(A) polymerase predicted RNA binding domain 0.02 OF
KHC75077 No alias Poly(A) polymerase PAPalpha;Poly(A) polymerase central... 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007012 PolA_pol_cen_dom 8 351
IPR007010 PolA_pol_RNA-bd_dom 353 531
IPR002934 Polymerase_NTP_transf_dom 81 154
No external refs found!