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  5. YFL001W

YFL001W


Description : tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability [Source:SGD;Acc:S000001895]


Gene families : OG_03_0001406 (OF) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YFL001W
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
CAG78377 No alias Pseudouridine synthase I, TruA, alpha/beta domain 0.07 OF
CAK44330 No alias tRNA pseudouridine synthase 0.04 OF
EDN96020 No alias Pseudouridine synthase I, TruA, alpha/beta domain 0.04 OF
ESU17934 No alias Pseudouridine synthase I, TruA, alpha/beta domain 0.04 OF
KHC75064 No alias tRNA pseudouridine(38-40) synthase;tRNA pseudouridine synthase 0.03 OF

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 239 346
No external refs found!