EDN96020

Description : Pseudouridine synthase I, TruA, alpha/beta domain

Gene families : OG_03_0001406 (OF) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDN96020
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AOA66544	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.08	OF
CAG78377	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.2	OF
CAK44330	No alias	tRNA pseudouridine synthase	0.04	OF
CBF83268	No alias	pseudouridylate synthase 3	0.04	OF
EAL92249	No alias	pseudouridylate synthase 3	0.02	OF
EAU87740	No alias	pseudouridine synthase	0.05	OF
EED54797	No alias	pseudouridylate synthase 3	0.02	OF
EGR45841	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.1	OF
ESA43611	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.06	OF
ESA43612	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.05	OF
ESU17934	No alias	Pseudouridine synthase I, TruA, alpha/beta domain	0.07	OF
KHC75064	No alias	tRNA pseudouridine(38-40) synthase;tRNA pseudouridine synthase	0.18	OF
MGG_16154T0	No alias	tRNA-pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:G4MKS9]	0.06	OF
SPAC25B8.05.1	No alias	tRNA-pseudouridine synthase Deg1 (predicted)...	0.06	OF
YFL001W	No alias	tRNA:pseudouridine synthase; introduces pseudouridines...	0.04	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	IEA	Interproscan
MF	GO:0009982	pseudouridine synthase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR020097	PsdUridine_synth_TruA_a/b_dom	300	436

External Links

No external refs found!