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EDN91568


Description : DNA2/NAM7 helicase-like, AAA domain


Gene families : OG_03_0000143 (OF) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDN91568
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AFR98003 No alias ATP-dependent helicase;Domain of unknown function... 0.03 OF
AGV14611 No alias DNA helicase;AAA domain 0.02 OF
AOA68249 No alias RNA helicase UPF1, UPF2-interacting domain 0.01 OF
CAG81409 No alias RNA helicase UPF1, UPF2-interacting domain 0.06 OF
CAK45574 No alias RNA helicase (UPF2 interacting domain) 0.03 OF
EAA31997 No alias DNA2/NAM7 helicase, AAA domain 0.05 OF
EAL87207 No alias DNA helicase, putative 0.02 OF
EAL90638 No alias regulator of nonsense transcripts, putative 0.08 OF
EAU88694 No alias ATP dependent helicase 0.03 OF
ESU16575 No alias ATP-dependent helicase NAM7 0.1 OF
KHC70522 No alias hypothetical protein;AAA domain 0.04 OF
KHC74964 No alias hypothetical protein;AAA domain;RNA helicase (UPF2... 0.03 OF
MGG_00976T0 No alias Regulator-nonsense transcripts 1... 0.12 OF
POW07607 No alias DNA2/NAM7 helicase, AAA domain;DNA2/NAM7 helicase-like,... 0.05 OF
SPAC16C9.06c.1 No alias ATP-dependent RNA helicase Upf1 [Source:PomBase;Acc:SPAC16C9.06c] 0.03 OF
YMR080C No alias ATP-dependent RNA helicase of the SFI superfamily;... 0.06 OF

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 451 524
IPR041677 DNA2/NAM7_AAA_11 551 654
IPR018999 RNA-helicase_UPF1_UPF2-interct 97 248
IPR040812 DUF5599 301 395
IPR041679 DNA2/NAM7-like_AAA 686 817
No external refs found!