EDN91508

Description : DNA replication factor RFC1, C-terminal

Gene families : OG_03_0001644 (OF) Phylogenetic Tree(s): OG0001644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDN91508
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AFR94048	No alias	replication factor C subunit 1;BRCA1 C Terminus (BRCT)...	0.06	OF
AOA66518	No alias	BRCT domain	0.04	OF
CAG83248	No alias	BRCT domain	0.06	OF
CAK37567	No alias	Replication factor RFC1 C terminal domain	0.03	OF
CBF69746	No alias	Replication factor C like protein	0.07	OF
EAA34303	No alias	BRCT domain	0.19	OF
EAL93516	No alias	DNA replication factor C subunit Rfc1, putative	0.05	OF
EAU82427	No alias	purine nucleotide binding protein	0.03	OF
EGR52246	No alias	BRCT domain	0.14	OF
EJF60036	No alias	ATPase family associated with various cellular activities (AAA)	0.02	OF
ESU05491	No alias	replication factor C subunit 1	0.11	OF
KHC81620	No alias	replication factor C subunit 1;ATPase family associated...	0.05	OF
MGG_03204T0	No alias	Replication factor C subunit 1...	0.02	OF
POW02010	No alias	ATPase, AAA-type, core;DNA replication factor RFC1,...	0.05	OF
SPBC23E6.07c.1	No alias	DNA replication factor C complex subunit Rfc1...	0.07	OF
YOR217W	No alias	Subunit of heteropentameric Replication factor C (RF-C);...	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003689	DNA clamp loader activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005663	DNA replication factor C complex	IEA	Interproscan
BP	GO:0006260	DNA replication	IEA	Interproscan
MF	GO:0008094	DNA-dependent ATPase activity	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0033170	protein-DNA loading ATPase activity	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	510	594
IPR001357	BRCT_dom	304	378
IPR013725	DNA_replication_fac_RFC1_C	787	939

External Links

No external refs found!

EDN91508

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation