EGR49259

Description : SKI-interacting protein SKIP, SNW domain

Gene families : OG_03_0003529 (OF) Phylogenetic Tree(s): OG0003529_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EGR49259
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
AOA68461	No alias	SKI-interacting protein SKIP, SNW domain	0.02	OF
CAG82045	No alias	SKI-interacting protein SKIP, SNW domain	0.03	OF
CAK40374	No alias	SKIP/SNW domain	0.02	OF
CBF74050	No alias	Pre-mRNA-processing protein 45	0.04	OF
EAA31952	No alias	SKI-interacting protein SKIP, SNW domain	0.05	OF
EAL86000	No alias	transcriptional regulator Cwf13/SkiP, putative	0.06	OF
ESU12164	No alias	pre-mRNA splicing factor prp45	0.07	OF
SPCC188.11.1	No alias	splicing factor Prp45 [Source:PomBase;Acc:SPCC188.11]	0.07	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004015	SKI-int_prot_SKIP_SNW-dom	190	348

External Links

No external refs found!