Description : U3 snoRNP-associated protein Utp13 (predicted) [Source:PomBase;Acc:SPCC16A11.02]
Gene families : OG_03_0002459 (OF) Phylogenetic Tree(s): OG0002459_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SPCC16A11.02.1 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AFR93710 | No alias | U3 small nucleolar RNA-associated protein 13;WD domain,... | 0.08 | OF | |
AOA68420 | No alias | Small-subunit processome, Utp13 | 0.05 | OF | |
CAG80271 | No alias | WD40 repeat | 0.09 | OF | |
CAL00677 | No alias | WD domain, G-beta repeat | 0.11 | OF | |
EAA32119 | No alias | WD40 repeat | 0.1 | OF | |
EAL90033 | No alias | small nucleolar ribonucleoprotein complex subunit, putative | 0.1 | OF | |
EAU92527 | No alias | U3 small nucleolar RNA-associated protein | 0.07 | OF | |
EDO00229 | No alias | WD40 repeat | 0.07 | OF | |
EGR52575 | No alias | Small-subunit processome, Utp13 | 0.07 | OF | |
ESU12932 | No alias | WD40 repeat | 0.1 | OF | |
KHC75155 | No alias | U3 small nucleolar RNA-associated protein 13;"WD domain,... | 0.13 | OF | |
MGG_08178T0 | No alias | U3 small nucleolar RNA-associated protein 13... | 0.05 | OF | |
POW15337 | No alias | WD40 repeat | 0.07 | OF | |
YLR222C | No alias | Nucleolar protein; component of the small subunit (SSU)... | 0.1 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
CC | GO:0032040 | small-subunit processome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001680 | WD40_repeat | 498 | 535 |
IPR001680 | WD40_repeat | 458 | 493 |
IPR001680 | WD40_repeat | 138 | 175 |
IPR001680 | WD40_repeat | 540 | 577 |
IPR001680 | WD40_repeat | 182 | 217 |
IPR001680 | WD40_repeat | 581 | 619 |
IPR001680 | WD40_repeat | 95 | 131 |
IPR001680 | WD40_repeat | 401 | 440 |
IPR001680 | WD40_repeat | 357 | 392 |
IPR013934 | SSU_processome_Utp13 | 640 | 777 |
No external refs found! |