SPCC16A11.02.1


Description : U3 snoRNP-associated protein Utp13 (predicted) [Source:PomBase;Acc:SPCC16A11.02]


Gene families : OG_03_0002459 (OF) Phylogenetic Tree(s): OG0002459_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPCC16A11.02.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AFR93710 No alias U3 small nucleolar RNA-associated protein 13;WD domain,... 0.08 OF
AOA68420 No alias Small-subunit processome, Utp13 0.05 OF
CAG80271 No alias WD40 repeat 0.09 OF
CAL00677 No alias WD domain, G-beta repeat 0.11 OF
EAA32119 No alias WD40 repeat 0.1 OF
EAL90033 No alias small nucleolar ribonucleoprotein complex subunit, putative 0.1 OF
EAU92527 No alias U3 small nucleolar RNA-associated protein 0.07 OF
EDO00229 No alias WD40 repeat 0.07 OF
EGR52575 No alias Small-subunit processome, Utp13 0.07 OF
ESU12932 No alias WD40 repeat 0.1 OF
KHC75155 No alias U3 small nucleolar RNA-associated protein 13;"WD domain,... 0.13 OF
MGG_08178T0 No alias U3 small nucleolar RNA-associated protein 13... 0.05 OF
POW15337 No alias WD40 repeat 0.07 OF
YLR222C No alias Nucleolar protein; component of the small subunit (SSU)... 0.1 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 498 535
IPR001680 WD40_repeat 458 493
IPR001680 WD40_repeat 138 175
IPR001680 WD40_repeat 540 577
IPR001680 WD40_repeat 182 217
IPR001680 WD40_repeat 581 619
IPR001680 WD40_repeat 95 131
IPR001680 WD40_repeat 401 440
IPR001680 WD40_repeat 357 392
IPR013934 SSU_processome_Utp13 640 777
No external refs found!