Description : tRNA pseudouridine synthase Lsp1 [Source:PomBase;Acc:SPCC126.03]
Gene families : OG_03_0001257 (OF) Phylogenetic Tree(s): OG0001257_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SPCC126.03.1 | |
Cluster | HCCA: Cluster_33 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AFR98591 | No alias | tRNA pseudouridine(38-40) synthase;tRNA pseudouridine synthase | 0.05 | OF | |
AOA66403 | No alias | Pseudouridine synthase I, TruA, alpha/beta domain | 0.18 | OF | |
CAG82083 | No alias | Pseudouridine synthase I, TruA, alpha/beta domain | 0.11 | OF | |
CBF70055 | No alias | tRNA pseudouridine synthase, putative | 0.18 | OF | |
EAL93142 | No alias | tRNA pseudouridine synthase, putative | 0.08 | OF | |
EAU90525 | No alias | pseudouridylate synthase | 0.06 | OF | |
EGR48689 | No alias | Pseudouridine synthase I, TruA, alpha/beta domain | 0.12 | OF | |
ESA43433 | No alias | Pseudouridine synthase I, TruA, alpha/beta domain | 0.01 | OF | |
ESU12695 | No alias | tRNA pseudouridine synthase 1 | 0.19 | OF | |
KHC73375 | No alias | tRNA pseudouridine synthase 1 | 0.15 | OF | |
MGG_07663T0 | No alias | tRNA pseudouridine synthase 1... | 0.12 | OF | |
POW08534 | No alias | Pseudouridine synthase I, TruA, alpha/beta domain | 0.02 | OF | |
YPL212C | No alias | tRNA:pseudouridine synthase; introduces pseudouridines... | 0.1 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020097 | PsdUridine_synth_TruA_a/b_dom | 330 | 429 |
No external refs found! |