SPBC21C3.01c.1

Description : chorein homolog Vps13a (predicted) [Source:PomBase;Acc:SPBC21C3.01c]

Gene families : OG_03_0001550 (OF) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC21C3.01c.1
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AFR97925	No alias	vacuolar protein sorting-associated protein...	0.09	OF
AOA65489	No alias	Vacuolar protein sorting-associated protein 13,...	0.04	OF
CAG77903	No alias	VPS13, repeated coiled region	0.06	OF
CBF81629	No alias	vacuolar protein sorting-associated protein vps13	0.02	OF
EAA30861	No alias	Vacuolar protein sorting-associated protein 13, C-terminal	0.04	OF
EAL89636	No alias	vacuolar protein sorting-associated protein vps13	0.03	OF
EAU93110	No alias	vacuolar protein sorting-associated protein vps13	0.02	OF
EED79585	No alias	VPS13, repeated coiled region	0.04	OF
EED83932	No alias	Peptidase M1, membrane alanine aminopeptidase	0.02	OF
EGR47054	No alias	Vacuolar protein sorting-associated protein 13, N-terminal domain	0.16	OF
ESU17262	No alias	Vacuolar protein sorting-associated protein 13, N-terminal domain	0.03	OF
KHC76680	No alias	hypothetical protein;Vacuolar-sorting-associated 13...	0.14	OF
MGG_06537T0	No alias	Vacuolar protein sorting-associated protein 13...	0.03	OF
POW05542	No alias	Vacuolar protein sorting-associated protein 13,...	0.05	OF
YLL040C	No alias	Protein involved in prospore membrane morphogenesis;...	0.09	OF

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR031646	VPS13_N2	143	372
IPR031645	VPS13_C	2662	2839
IPR009543	SHR-BD	2143	2415
IPR031642	VPS13_mid_rpt	591	821
IPR026854	VPS13_N	2	115

External Links

No external refs found!