SPBC11C11.10.1

Description : tRNA pseudouridine synthase Pus4 (predicted) [Source:PomBase;Acc:SPBC11C11.10]

Gene families : OG_03_0003223 (OF) Phylogenetic Tree(s): OG0003223_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC11C11.10.1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AFR97828	No alias	tRNA pseudouridine(55) synthase;TruB family...	0.03	OF
CAK43580	No alias	TruB family pseudouridylate synthase (N terminal domain)	0.03	OF
EAL91383	No alias	pseudouridine synthase	0.03	OF
POW16073	No alias	Pseudouridine synthase II, N-terminal	0.03	OF
YNL292W	No alias	Pseudouridine synthase; catalyzes only the formation of...	0.02	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002501	PsdUridine_synth_N	107	232

External Links

No external refs found!