SPAC4G8.07c.1

Description : tRNA (m5U54) methyltransferase Trm2 (predicted) [Source:PomBase;Acc:SPAC4G8.07c]

Gene families : OG_03_0001357 (OF) Phylogenetic Tree(s): OG0001357_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPAC4G8.07c.1
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AFR97309	No alias	tRNA (uracil-5-)-methyltransferase;tRNA...	0.03	OF
CAG78461	No alias	TRAM domain	0.04	OF
CAK48706	No alias	tRNA (Uracil-5-)-methyltransferase	0.04	OF
CBF90119	No alias	tRNA methyltransferase	0.08	OF
EAA34385	No alias	(Uracil-5)-methyltransferase family	0.1	OF
EAL91457	No alias	tRNA(m5U54)methyltransferase	0.03	OF
EAU93579	No alias	tRNA methyltransferase	0.02	OF
EDN98555	No alias	(Uracil-5)-methyltransferase family	0.07	OF
EGR45831	No alias	(Uracil-5)-methyltransferase family	0.03	OF
ESU17907	No alias	(Uracil-5)-methyltransferase family	0.03	OF
KHC82925	No alias	tRNA (uracil-5-)-methyltransferase;tRNA...	0.05	OF
MGG_03881T0	No alias	tRNA (Uracil-5-)-methyltransferase...	0.08	OF
YKR056W	No alias	tRNA methyltransferase; 5-methylates the uridine residue...	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010280	U5_MeTrfase_fam	337	524
IPR002792	TRAM_dom	109	166

External Links

No external refs found!