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  5. SPAC2F3.03c.1

SPAC2F3.03c.1


Description : DNA-directed RNA polymerase I complex subunit Rpa49 (predicted) [Source:PomBase;Acc:SPAC2F3.03c]


Gene families : OG_03_0003008 (OF) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC2F3.03c.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AFR93137 No alias DNA-directed RNA polymerase I subunit RPA49;A49-like RNA... 0.2 OF
AOA68634 No alias RNA polymerase I associated factor, A49-like 0.18 OF
CAG79156 No alias RNA polymerase I associated factor, A49-like 0.22 OF
CAK43043 No alias A49-like RNA polymerase I associated factor 0.24 OF
CBF86529 No alias conserved hypothetical protein 0.21 OF
EAA27889 No alias RNA polymerase I associated factor, A49-like 0.23 OF
EAL91967 No alias conserved hypothetical protein 0.11 OF
EAU87662 No alias Rpa49 subunit specific to nuclear RNA polymerase I 0.05 OF
EDN90852 No alias RNA polymerase I associated factor, A49-like 0.13 OF
EGR45977 No alias RNA polymerase I associated factor, A49-like 0.24 OF
EJF57477 No alias A49-like RNA polymerase I associated factor 0.05 OF
ESU11524 No alias RNA polymerase I associated factor, A49-like 0.31 OF
KHC81184 No alias DNA-directed RNA polymerase I subunit RPA49;A49-like RNA... 0.14 OF
MGG_06381T0 No alias Putative uncharacterized protein... 0.26 OF
YNL248C No alias RNA polymerase I subunit A49; essential for nucleolar... 0.29 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009668 RNA_pol-assoc_fac_A49-like 47 422
No external refs found!