SPAC167.03c.1

Description : U4/U6 x U5 tri-snRNP complex subunit Snu66 [Source:PomBase;Acc:SPAC167.03c]

Gene families : OG_03_0003216 (OF) Phylogenetic Tree(s): OG0003216_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPAC167.03c.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AOA69974	No alias	SNU66/SART1 family	0.03	OF
CAG82975	No alias	SNU66/SART1 family	0.04	OF
CAK38899	No alias	SART-1 family	0.02	OF
CBF85968	No alias	DNA binding protein SART-1, putative	0.02	OF
EAL89746	No alias	DNA binding protein SART-1, putative	0.04	OF
EAU85380	No alias	SNU66/SART1 family	0.08	OF
ESU12353	No alias	SNU66/SART1 family	0.04	OF
KHC75199	No alias	U4/U6.U5 tri-snRNP-associated protein 1;SART-1 family	0.04	OF
MGG_01095T0	No alias	Putative uncharacterized protein...	0.04	OF
YOR308C	No alias	Component of the U4/U6.U5 snRNP complex; involved in...	0.06	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005011	SNU66/SART1	10	639

External Links

No external refs found!