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  5. SPAC1486.05.1

SPAC1486.05.1


Description : nucleoporin Nup98 and Nup96 [Source:PomBase;Acc:SPAC1486.05]


Gene families : OG_03_0000675 (OF) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC1486.05.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AFR93115 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.09 OF
AOA66079 No alias Nucleoporin FG repeat 0.05 OF
AOA67446 No alias Peptidase S59, nucleoporin 0.09 OF
CAG78795 No alias Nucleoporin FG repeat 0.02 OF
CAG81152 No alias Peptidase S59, nucleoporin 0.07 OF
CAK38825 No alias Nuclear protein 96 0.09 OF
CBF81523 No alias Putative uncharacterized proteinSONB 0.11 OF
EAA31174 No alias Peptidase S59, nucleoporin 0.05 OF
EAL89683 No alias nucleoporin SONB, putative 0.09 OF
EDN90941 No alias Nucleoporin FG repeat 0.1 OF
EFI27761 No alias nucleoporin autopeptidase 0.04 OF
EGR44470 No alias Nuclear protein 96 0.09 OF
ESU14851 No alias Nucleoporin FG repeat 0.15 OF
KHC76605 No alias hypothetical protein;Nuclear protein 96;Nucleoporin FG... 0.11 OF
MGG_04617T0 No alias Putative uncharacterized protein... 0.03 OF
YGL092W No alias Essential protein with distinct roles in two nuclear... 0.19 OF
YMR047C No alias FG-nucleoporin component of central core of the nuclear... 0.05 OF

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025574 Nucleoporin_FG_rpt 564 648
IPR025574 Nucleoporin_FG_rpt 250 312
IPR025574 Nucleoporin_FG_rpt 314 401
IPR025574 Nucleoporin_FG_rpt 453 546
IPR025574 Nucleoporin_FG_rpt 38 132
IPR007230 Peptidase_S59 822 967
IPR021967 Nup96 1360 1654
No external refs found!