1. Home
  2. Species
  3. Yarrowia lipolytica
  4. Sequence
  5. CAG82593

CAG82593


Description : Spt6, SH2 domain


Gene families : OG_03_0002299 (OF) Phylogenetic Tree(s): OG0002299_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAG82593
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AFR93450 No alias transcription elongation factor SPT6;HHH... 0.06 OF
AOA69963 No alias Helix-turn-helix DNA-binding domain of Spt6 0.06 OF
CAK40869 No alias HHH domain 0.07 OF
CBF82740 No alias Transcription elongation factor spt6 0.06 OF
EAA29618 No alias S1 domain 0.06 OF
EAL92977 No alias transcription elongation factor SPT6, putative 0.11 OF
EAU88502 No alias transcription elongation factor SPT6 0.03 OF
EGR50631 No alias Spt6 acidic, N-terminal domain 0.04 OF
ESU16548 No alias transcription elongation factor SPT6 0.08 OF
KHC72099 No alias transcription elongation factor SPT6;Acidic N-terminal... 0.05 OF
MGG_11491T0 No alias Transcription elongation factor SPT6... 0.03 OF
POW06379 No alias HHH domain 9;Spt6 acidic, N-terminal... 0.03 OF
SPAC1F7.01c.1 No alias nucleosome remodeling protein Spt6... 0.05 OF
YGR116W No alias Nucleosome remodeling protein; functions in various... 0.05 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR028083 Spt6_acidic_N_dom 45 136
IPR032706 Spt6_HHH 870 970
IPR028088 Spt6_HTH_DNA-bd_dom 291 429
IPR028231 Spt6_YqgF 723 867
IPR035420 Spt6_SH2 1189 1397
No external refs found!