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  5. CAG78795

CAG78795


Description : Nucleoporin FG repeat


Gene families : OG_03_0000675 (OF) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAG78795
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AFR93115 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.02 OF
CAK38825 No alias Nuclear protein 96 0.04 OF
CBF81523 No alias Putative uncharacterized proteinSONB 0.04 OF
EAL89683 No alias nucleoporin SONB, putative 0.03 OF
EDN90941 No alias Nucleoporin FG repeat 0.03 OF
EFI27761 No alias nucleoporin autopeptidase 0.04 OF
ESU14851 No alias Nucleoporin FG repeat 0.04 OF
KHC76605 No alias hypothetical protein;Nuclear protein 96;Nucleoporin FG... 0.04 OF
KHC79185 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.03 OF
SPAC1486.05.1 No alias nucleoporin Nup98 and Nup96 [Source:PomBase;Acc:SPAC1486.05] 0.02 OF
YMR047C No alias FG-nucleoporin component of central core of the nuclear... 0.03 OF

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 956 1096
IPR025574 Nucleoporin_FG_rpt 256 335
IPR025574 Nucleoporin_FG_rpt 148 228
IPR025574 Nucleoporin_FG_rpt 482 551
IPR025574 Nucleoporin_FG_rpt 338 417
IPR025574 Nucleoporin_FG_rpt 588 666
IPR025574 Nucleoporin_FG_rpt 1 81
No external refs found!