POW05317

Description : Pseudouridine synthase, TruD

Gene families : OG_03_0002653 (OF) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: POW05317
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AFR94528	No alias	tRNA pseudouridine13 synthase;tRNA pseudouridine...	0.02	OF
CAG80481	No alias	Pseudouridine synthase, TruD	0.02	OF
EAL91002	No alias	pseudouridine synthase TruD/Pus7, putative	0.03	OF
EDN90663	No alias	Pseudouridine synthase, TruD	0.04	OF
EGR52724	No alias	Pseudouridine synthase, TruD	0.02	OF
EJF61174	No alias	tRNA pseudouridine synthase D (TruD)	0.02	OF
ESU13531	No alias	Pseudouridine synthase, TruD	0.02	OF
KHC82056	No alias	TruD family tRNA pseudouridine synthase;tRNA...	0.04	OF
MGG_06481T0	No alias	tRNA pseudouridine synthase D...	0.04	OF
SPBC1A4.09.1	No alias	pseudouridine synthase Pus7 (predicted)...	0.02	OF
YOR243C	No alias	Pseudouridine synthase; catalyzes pseudouridylation at...	0.02	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	IEA	Interproscan
MF	GO:0009982	pseudouridine synthase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001656	PsdUridine_synth_TruD	328	774

External Links

No external refs found!