ESU16930

Description : PRP1 splicing factor, N-terminal

Gene families : OG_03_0001682 (OF) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ESU16930
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AFR92218	No alias	pre-mRNA-processing factor 6;PRP1 splicing factor,...	0.03	OF
AOA69845	No alias	PRP1 splicing factor, N-terminal	0.02	OF
CAG82333	No alias	PRP1 splicing factor, N-terminal	0.02	OF
CAK48894	No alias	Tetratricopeptide repeat	0.08	OF
CBF79397	No alias	mRNA splicing factor	0.02	OF
EAL87698	No alias	mRNA splicing factor (Prp1/Zer1), putative	0.07	OF
EDO02532	No alias	Tetratricopeptide repeat	0.07	OF
EGR45600	No alias	Tetratricopeptide repeat	0.04	OF
ESA42407	No alias	Tetratricopeptide repeat	0.03	OF
KHC84003	No alias	pre-mRNA-processing factor 6;"PRP1 splicing factor, N-terminal"	0.07	OF
MGG_07213T0	No alias	Pre-mRNA-splicing factor prp1...	0.07	OF
POV96798	No alias	PRP1 splicing factor, N-terminal	0.04	OF
SPBC6B1.07.1	No alias	U4/U6 x U5 tri-snRNP complex subunit Prp1...	0.08	OF
YBR055C	No alias	Splicing factor; component of the U4/U6-U5 snRNP complex...	0.05	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010491	PRP1_N	12	168

External Links

No external refs found!