Description : ATP-dependent helicase NAM7

Gene families : OG_03_0000143 (OF) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: ESU16575
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AFR98003 No alias ATP-dependent helicase;Domain of unknown function... 0.04 OF
AOA66643 No alias DNA2/NAM7 helicase-like, AAA domain 0.03 OF
CAG81409 No alias RNA helicase UPF1, UPF2-interacting domain 0.04 OF
CAK45574 No alias RNA helicase (UPF2 interacting domain) 0.07 OF
EAA31997 No alias DNA2/NAM7 helicase, AAA domain 0.11 OF
EAL90638 No alias regulator of nonsense transcripts, putative 0.19 OF
EAU83962 No alias DNA helicase 0.01 OF
EAU88694 No alias ATP dependent helicase 0.03 OF
EDN91568 No alias DNA2/NAM7 helicase-like, AAA domain 0.1 OF
EDO00248 No alias DNA2/NAM7 helicase-like, AAA domain 0.02 OF
KHC70522 No alias hypothetical protein;AAA domain 0.05 OF
KHC74964 No alias hypothetical protein;AAA domain;RNA helicase (UPF2... 0.05 OF
MGG_00976T0 No alias Regulator-nonsense transcripts 1... 0.1 OF
POW07607 No alias DNA2/NAM7 helicase, AAA domain;DNA2/NAM7 helicase-like,... 0.02 OF
SPAC16C9.06c.1 No alias ATP-dependent RNA helicase Upf1 [Source:PomBase;Acc:SPAC16C9.06c] 0.04 OF
SPCC737.07c.1 No alias DNA polymerase alpha-associated DNA helicase A... 0.02 OF
YMR080C No alias ATP-dependent RNA helicase of the SFI superfamily;... 0.11 OF

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 448 530
IPR040812 DUF5599 297 391
IPR041679 DNA2/NAM7-like_AAA 657 853
IPR018999 RNA-helicase_UPF1_UPF2-interct 93 242
IPR041677 DNA2/NAM7_AAA_11 547 650
No external refs found!