Heatmap: Cluster_10 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	FB cap+lamellae,YMG,strain #326	FB stipe,YMG,strain #326	Hyphal knots,control,strain #326	Mycelium	Mycelium,Co-culture B.subtilis,28C,8h	Mycelium,Co-culture E.coli,28C,8h	Mycelium,LiCl,strain #326	Mycelium,Predation A.avenae,20h,matA/matB KO	Mycelium,Predation A.avenae,2h,matA/matB KO	Mycelium,Predation A.avenae,8h,matA/matB KO	Mycelium,control,20C,matA/matB KO	Mycelium,control,28C,8h	Mycelium,control,strain #326	Stg 1 primordium,YMG,strain #326	Stg 2 primordium,YMG,strain #326	Mycelium,Co-culture B.subtilis,YMG,strain #130	Mycelium,Co-culture E.coli,YMG,strain #130	Mycelium,Dark 37C 96h,YMG,matA43/matB43 KO	Mycelium,Dark 37h 120h,YMG,strain #130	Mycelium,Mechanical damage,YMG,strain #130	Mycelium,Predation A.avenae,YMG,strain #130	Mycelium,Predation C.elegans,YMG,strain #130	Vegetative mycelium,YMG,strain #326	Mycelium,control,YMG,37C,strain #130	YFB cap,YMG,strain #326	YFB lamellae,YMG,strain #326	secondary hyphal knots,YMG,strain #326	strain #130
EAU80205	-	-	-2.64	4.79	-	-	-	-	-	-3.82	-3.91	-	-4.23	-	-4.61	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU80313	-2.82	-2.14	-2.78	1.31	0.04	-0.12	-1.09	0.14	0.94	0.56	1.07	0.93	0.46	-0.73	-1.03	0.91	-0.76	-1.71	-0.15	0.2	0.13	0.63	-0.83	0.15	-1.41	-1.71	-3.72	0.78
EAU80464	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU80576	-1.44	-0.55	-0.8	1.5	-0.63	-0.63	-0.41	-1.71	-	-2.59	0.13	-2.69	-0.37	-1.02	-0.86	-0.28	0.2	1.42	1.67	1.3	-0.67	0.21	0.09	-0.12	-0.83	1.11	-2.34	-0.02
EAU80701	-1.53	-0.04	-0.88	0.26	0.46	0.61	0.15	0.25	0.29	0.52	0.18	0.46	0.31	0.49	0.22	-0.65	-1.14	-0.31	-0.25	-0.37	-0.28	-0.7	0.07	-0.51	-0.01	0.54	0.25	-1.22
EAU80716	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU80828	-	-	-	1.73	-	-	-	-	-	-	-	-	-	-	-	2.4	2.16	-	2.43	-0.83	0.97	1.55	-	0.11	-	-	-	1.59
EAU80834	-	-	-	0.06	-	-	-	-	-	-	-	-	-	-	-	2.52	1.17	-	0.63	2.49	1.93	1.8	-	1.69	-	-	-	0.38
EAU80835	-	-	-	0.81	-	-	-	-	-	-	-	-	-	-	-	2.23	1.61	-	-	1.8	1.22	1.35	-	2.69	-	-	-	1.87
EAU81004	-1.87	-3.93	-2.36	3.62	-1.15	-2.88	1.1	0.59	-0.49	1.6	-2.68	-1.94	1.36	-4.14	-3.95	-1.49	-1.94	-3.09	-1.35	-0.7	-2.21	-1.47	-4.41	-1.45	-5.52	-4.86	-3.15	0.25
EAU81111	-	-	-	4.54	-	-	-	-	0.54	-	-	-	-	-	-	-	0.75	-	-	-	-	-	-	0.72	-	-	-	-
EAU81842	0.15	-3.07	-0.51	1.69	0.09	0.96	0.16	-0.28	-0.18	-0.03	0.05	0.36	-0.08	-1.63	-1.68	0.29	0.31	-1.5	0.74	0.11	-0.64	0.23	-0.47	-0.32	-2.24	-1.55	-1.44	1.2
EAU81843	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-5.95	-	-	-	-	-	-	-	-	-
EAU81844	-6.69	-	-	4.81	-	-	-	-	-	-7.27	-	-	-	-	-	-	-	-	-	-7.12	-	-	-	-	-	-	-	-
EAU81889	-	-4.47	-	4.71	-	-	-4.04	-	-3.08	-2.97	-2.09	-3.16	-3.07	-	-3.91	-	-	-	-	-2.82	-	-	-	-	-3.23	-0.48	-	-
EAU81897	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU81898	-	0.77	-	4.72	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU81986	-7.11	-2.1	0.26	1.24	-0.13	-0.11	0.68	-0.86	0.49	-0.23	0.5	0.51	0.1	-0.79	-0.78	-0.02	-0.08	-0.39	-0.51	0.32	-0.51	0.27	0.27	0.37	-1.68	-2.2	-0.78	1.44
EAU82514	-	-	-	3.61	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.53	3.33	-	-	-	-	-	-	-
EAU82801	-	-	-	0.48	-	-	-	-	-	-	-	-	-	-	-	1.56	1.56	-	0.85	2.08	1.49	1.89	-	1.86	-	-	-	2.18
EAU82816	-3.33	-3.36	-4.73	0.49	-4.96	-5.96	-4.04	-3.47	-2.84	-3.33	-3.02	-6.11	-4.03	-5.11	-6.71	1.62	0.76	-4.67	1.89	2.06	1.46	1.38	-3.02	1.56	-	-	-3.11	2.16
EAU82827	-1.48	-0.06	0.02	-0.18	0.09	-0.39	-0.46	-1.0	-0.62	-0.9	-0.48	0.08	-0.39	-0.56	-0.44	0.56	0.69	1.68	0.28	0.17	0.12	0.34	-0.73	0.36	0.31	0.05	-0.7	-0.28
EAU82876	-2.97	-0.66	-1.5	0.32	-0.68	-0.26	-2.85	-1.72	-1.85	-2.59	-1.82	-1.09	-2.6	-1.56	-1.78	1.75	1.53	1.13	0.9	1.01	1.32	1.28	-1.36	1.26	-3.39	-1.93	-1.64	0.05
EAU82884	-	-	-	0.94	-	-	-	-	-	-	-	-	-	-	-	1.44	2.03	-	1.47	1.64	1.59	1.71	-	1.61	-	-	-	2.01
EAU82910	-5.06	-3.79	0.82	0.05	-1.74	-2.94	-0.91	-0.46	0.01	-1.04	0.18	-1.93	-0.17	-0.9	-0.33	1.02	-0.03	2.24	1.47	0.63	-0.59	0.31	0.58	0.38	-4.93	-3.08	-0.47	-0.53
EAU82932	-4.08	-0.81	-0.14	-0.12	-2.2	-1.55	1.18	-1.61	-2.07	-0.76	-1.93	-2.64	-0.2	0.29	0.25	0.92	0.45	-1.13	0.7	0.87	1.19	0.67	-0.59	0.99	-2.7	-2.58	0.95	0.93
EAU82933	-4.59	-1.72	-2.36	0.2	-3.21	-1.95	0.02	-2.53	-3.82	-1.48	-3.28	-2.88	-1.22	-0.43	-0.59	1.55	1.11	0.45	0.91	1.35	1.77	1.23	-1.1	1.15	-3.72	-3.97	-0.29	0.99
EAU82940	-2.38	-4.5	-0.68	-0.06	-0.4	-0.95	-1.05	-0.47	-0.88	-0.72	-0.83	-1.26	-1.45	-3.26	-2.96	1.2	0.9	1.7	0.71	1.38	1.01	1.22	-1.12	1.15	-3.13	-0.44	-3.24	0.43
EAU83032	-	-	-	0.55	-	-	-	-	-	-	-	-	-	-	-	1.33	1.64	-	0.77	0.82	1.77	1.91	-	1.57	-	-	-	2.87
EAU83034	-4.38	-5.08	0.83	-1.54	-1.75	-0.3	1.49	-1.28	-2.51	-1.3	-4.72	-4.74	1.36	-0.67	-0.42	-0.28	1.61	-0.04	-0.59	-0.21	1.31	-0.28	-0.96	0.12	-3.85	-6.41	1.38	1.53
EAU83339	0.38	-0.15	1.01	2.18	-	-0.87	0.18	0.06	1.12	0.78	-	-	-0.92	-0.51	-0.72	-	-	0.45	-	-	-	0.42	-1.4	1.42	1.29	-0.17	-	0.77
EAU83340	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU83688	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU83821	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU84617	2.16	-1.25	-1.59	0.85	2.1	0.2	-0.92	-1.67	-0.58	-1.94	-0.64	2.2	-0.7	-0.94	-0.92	-1.42	-0.81	-1.46	-1.44	-1.02	-1.04	-1.02	-0.79	-0.9	-0.64	0.24	-1.43	-1.36
EAU84779	-2.06	-2.14	0.25	0.9	0.44	-0.49	-0.62	-0.5	0.21	-1.35	0.18	0.24	-0.95	0.6	0.63	0.31	-1.16	0.33	0.62	0.34	0.26	0.12	0.69	0.37	-2.25	-0.64	0.66	-2.19
EAU85008	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU86824	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU86884	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU86898	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU87415	-7.73	-6.37	-3.06	1.44	-0.88	-2.97	-0.9	1.08	0.42	-1.14	-0.11	-1.36	-1.08	-7.12	-5.0	0.8	1.86	-1.87	-0.22	0.93	0.7	1.3	-0.66	1.14	-6.24	-	-2.45	1.42
EAU87500	-	-	-	2.98	-	3.0	2.23	-	-	-	-	2.89	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU87666	-2.9	-0.94	-0.89	-0.23	-2.29	-3.14	-0.96	-1.39	-1.24	-1.72	-1.04	-2.4	-1.04	-0.97	-0.86	0.84	0.59	-0.9	1.3	1.21	1.18	1.07	-1.04	1.05	-1.41	1.43	-0.4	1.28
EAU87769	-	-	-	0.23	-	-	-8.1	-	-	-	-	-	-	-7.92	-8.17	2.18	1.35	-	0.98	2.11	1.92	1.79	-	1.92	-	-	-	1.28
EAU88029	-	-	-	2.73	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.42	-	-	-	-	-	-
EAU88619	-6.0	-2.15	-0.99	0.92	-0.25	-1.27	-0.21	-0.06	-0.32	1.5	0.26	-0.18	0.8	-3.93	-3.48	0.26	0.41	0.71	1.17	0.05	0.43	-0.1	-1.49	0.03	-3.14	1.22	-3.28	0.04
EAU88634	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU88635	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU89768	-	1.21	-	2.33	-	-	-	-	-	-	-	-	-	-	-	2.61	-	-	-	-	-	3.86	-	-	-	-	-	-
EAU90785	-2.71	0.73	-0.54	1.43	-0.67	-0.76	-0.06	0.71	0.98	1.4	0.99	-0.64	0.0	-1.07	-0.84	-0.23	-0.57	-0.52	-1.26	0.01	-0.72	-0.25	-0.09	-0.7	-1.45	-1.41	-0.49	0.68
EAU90796	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU91018	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EAU92456	2.32	-3.74	1.11	1.18	0.1	-1.17	0.01	-3.73	-1.64	-4.26	-1.99	0.22	2.02	-3.98	-3.23	-2.85	-2.44	-0.61	-0.85	-0.23	-1.9	0.44	0.01	-0.53	-4.31	-2.5	-2.06	1.89
EAU92457	2.69	-2.59	0.74	0.51	-2.09	-2.65	-1.89	-9.28	-6.65	-	-5.54	-1.69	-0.17	-1.88	-1.9	-1.12	-0.84	-1.38	-0.76	0.13	0.26	0.18	1.65	0.11	1.62	-5.64	-0.41	1.22
EAU92496	-	-	-	-0.22	-	-	-0.28	-	-	-	-	-	-	-0.77	0.49	1.47	0.23	0.14	0.06	-	2.93	1.23	-1.59	0.23	-	-0.37	-	2.59
EAU93607	-	-0.92	-0.38	2.43	-0.54	-	0.48	-0.59	-0.64	-0.56	0.32	-	-	1.29	-1.48	-	-	1.68	2.53	-	-	-	-	-0.48	-	1.8	-	-
EAU93667	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI26526	-	-	-	4.78	-	-	-	-	-	-	-	-	-1.94	-	-	-	-	-	-	-	-	-	-4.33	-	-4.13	-	-	-2.32
EFI26553	-	1.16	2.64	2.98	-	-	-	-	-	-	-	-	-	-	-	3.55	-	-	-	-	-	-	-	-	-	-	-	-
EFI26707	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI26723	-5.71	-3.59	1.67	1.65	-3.73	-3.73	-0.62	-	-2.74	-2.24	-1.27	-2.07	0.38	-1.42	-0.01	-4.11	-1.77	3.52	0.08	-0.81	-0.23	-0.28	-1.48	0.14	-5.49	-2.64	-3.44	-2.09
EFI26735	-	-0.33	1.12	0.31	0.95	0.89	-0.15	-	-	-	-	1.79	-	2.48	2.45	1.23	-	-	-	-	-	-	-	-	-	-	1.17	-
EFI26863	-2.05	-0.22	-1.89	-0.83	-2.0	-3.72	-0.39	-1.93	-1.44	-1.25	-2.77	-2.84	-1.19	-1.68	-1.7	1.56	1.96	-2.46	0.19	1.3	1.97	1.51	-1.29	1.62	-1.69	-1.06	-0.71	-1.68
EFI26866	-3.89	-	-	2.45	-0.67	1.48	-0.71	1.59	-2.24	-0.29	-2.97	-1.15	1.72	-	-	-2.58	-0.31	1.34	-0.46	-4.31	-0.24	-0.26	-5.07	-0.37	-	-	-	1.91
EFI26879	-	-	-	0.93	-	-	-	-	-	-	-	-	-	-	-	1.39	1.78	-	0.84	1.98	1.62	2.02	-	1.75	-	-	-	1.93
EFI26880	-	-	-	1.54	-	-	-	-	-	-	-	-	-	-	-	1.53	1.85	-	1.02	1.82	2.14	1.9	-	1.49	-	-	-	1.05
EFI26883	-0.1	-0.48	-3.19	-0.54	-1.18	-1.15	-1.89	-1.56	-0.69	-0.82	-0.7	-0.4	-3.53	-2.61	-1.46	0.49	1.88	1.27	-1.37	1.37	0.33	1.8	-0.24	1.5	-2.07	-1.2	-2.21	0.16
EFI26884	-	-	-	1.41	-	-	-	-	-	3.21	-	-	-	-	2.43	-	-	-	-	-	-	3.42	-	-	-	-	-	-
EFI26887	-	-	-	0.25	-	-	-	-	-	-	-	-	-	-	-	1.88	2.03	-	1.1	1.82	1.91	2.1	-	1.84	-	-	-	0.84
EFI27024	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI27026	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI27126	-	-	-	1.65	-	-	-	-	-	-	-	-	-	-	-	-	2.64	-	1.91	-0.54	-	1.83	-	0.52	-	-	-	3.2
EFI27239	0.32	-	-0.06	1.02	-	-	-	-	-	-	-	-	-0.36	-	-	1.57	0.88	-	0.74	-	1.66	0.95	0.22	1.5	-	-	-	2.89
EFI27293	2.34	0.77	0.62	1.02	-0.55	-	0.04	-	0.32	-	-	-	-	-0.3	-0.45	-	-	2.21	-	-	-	-	-	-	2.51	-1.05	1.22	-
EFI27418	-1.83	-0.29	-0.61	0.49	-0.92	-0.47	-0.05	-0.28	-0.35	-0.22	-0.04	-1.07	-0.12	-0.13	-0.47	0.5	0.91	-0.84	-0.08	0.29	0.62	0.87	0.03	0.72	-0.99	-1.15	0.49	0.82
EFI27434	-3.99	0.06	-0.27	0.87	-2.81	-1.79	0.29	-0.08	0.39	-0.06	0.83	-1.64	-0.3	0.7	0.54	-1.33	-0.99	2.07	-0.96	-1.45	-0.51	-0.48	1.02	-0.74	-2.67	-0.84	0.1	0.63
EFI27456	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI27593	-	-	-	4.81	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
EFI27733	-2.56	-0.44	-1.14	1.63	-0.61	-1.76	-1.08	-2.14	-0.46	-2.43	-0.12	0.24	-1.56	-0.14	0.32	0.08	0.33	-1.69	-0.62	0.43	0.18	0.41	0.88	0.56	-0.5	0.44	-0.49	1.67
EFI28336	-3.64	-2.84	0.24	0.05	-0.26	-0.02	0.89	0.87	0.53	1.49	0.68	-0.39	0.24	-0.3	-0.18	0.05	-0.17	-0.05	-1.22	0.04	0.05	-0.14	0.03	-0.16	-2.43	-2.5	0.19	-0.2
EFI28343	-0.07	-2.25	1.15	1.23	0.6	0.89	-1.14	0.22	-1.63	-0.71	-1.13	-0.51	-1.52	-2.14	-2.14	-2.03	-1.44	-1.27	-1.16	-0.69	-1.58	-1.38	-0.43	-1.37	-1.56	3.14	-1.61	-0.02
EFI28460	0.54	-0.67	-0.08	0.33	0.01	0.47	-0.17	0.51	0.17	0.38	0.37	-0.19	0.07	-1.26	-1.15	0.03	-0.04	-0.53	-0.58	0.08	-0.15	-0.01	-0.26	-0.03	0.22	0.27	-0.51	0.36
EFI28507	-1.42	0.17	-3.36	0.39	-3.79	-2.23	-1.5	-3.93	-3.52	-1.78	-2.96	-3.6	-2.97	-0.25	-0.44	1.33	1.26	-1.91	1.33	1.58	1.24	1.24	-2.25	1.39	-0.01	-2.74	-0.54	1.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.