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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.19 | -1.87 | -1.6 | -3.38 | -3.76 | -2.69 | -5.47 | -2.38 | -2.75 | -3.89 | 0.13 | -2.94 | -2.06 | 2.33 | -2.42 | 2.34 | -2.9 | 1.97 | -2.1 | -3.14 | -2.18 | -1.02 | 0.95 | -1.94 | -2.21 | -3.33 | 2.02 | -3.77 | -2.54 | -1.38 | -3.36 | 2.18 | -1.3 | -1.29 | -2.55 | -2.25 | -2.11 | -2.92 | -2.29 | 2.56 | -1.96 | 3.21 | -1.75 | -2.52 | 2.12 | -2.35 | -2.5 | -1.54 | -5.15 | - | -3.08 | -5.31 | -2.06 | 0.78 | -2.57 | -1.42 | -2.72 | -2.99 | -1.9 | -1.29 | 2.3 | -1.27 | 0.08 | |
| -2.8 | -1.36 | -1.81 | -2.78 | -2.69 | -1.89 | -3.01 | -1.53 | -1.94 | -2.75 | 0.03 | -3.12 | -2.05 | 2.43 | -1.98 | 2.44 | -2.82 | 2.13 | -2.41 | -2.02 | -1.54 | -0.95 | 0.27 | -0.88 | -3.0 | -2.61 | 1.88 | -2.59 | -1.65 | -1.83 | -2.05 | 2.31 | -1.58 | -1.4 | -2.11 | -1.81 | -1.23 | -1.95 | -2.11 | 2.43 | -2.12 | 2.75 | -1.18 | -2.71 | 2.52 | -1.42 | -0.96 | -1.08 | -4.39 | -5.34 | -4.16 | -5.12 | -1.73 | 1.31 | -3.39 | -0.84 | -1.96 | -2.49 | -1.82 | -1.92 | 1.57 | -2.08 | -0.38 | |
| -2.04 | -1.93 | -1.38 | -1.66 | -2.5 | -1.26 | -2.32 | -1.97 | -2.37 | -2.16 | -1.38 | -3.07 | -3.1 | 2.71 | -2.76 | 2.56 | -2.67 | 2.76 | -2.85 | -0.47 | -1.68 | -3.24 | -2.14 | -3.23 | -3.53 | -3.38 | 0.8 | -1.99 | -3.12 | -2.76 | -3.46 | 2.89 | -1.31 | -1.23 | -2.72 | -2.67 | -2.2 | -4.4 | -1.37 | 2.43 | -2.72 | 2.14 | -1.92 | -2.39 | 2.98 | -1.42 | -1.79 | -1.82 | -6.02 | -7.39 | -4.95 | -4.85 | -2.23 | 1.37 | -1.8 | -1.89 | -1.13 | -1.99 | -1.77 | -1.76 | 0.63 | -2.01 | 0.08 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.