View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
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2.78 | 3.47 | 4.18 | 1.22 | 0.93 | 1.96 | 0.29 | 2.44 | 1.88 | 0.86 | 13.86 | 1.65 | 3.05 | 63.59 | 2.36 | 64.21 | 1.7 | 49.6 | 2.95 | 1.44 | 2.8 | 6.25 | 24.5 | 3.31 | 2.73 | 1.26 | 51.26 | 0.93 | 2.18 | 4.85 | 1.24 | 57.51 | 5.14 | 5.16 | 2.17 | 2.66 | 2.94 | 1.68 | 2.6 | 74.47 | 3.26 | 117.6 | 3.78 | 2.21 | 54.97 | 2.49 | 2.23 | 4.36 | 0.36 | 0.0 | 1.5 | 0.32 | 3.03 | 21.73 | 2.14 | 4.74 | 1.92 | 1.59 | 3.39 | 5.18 | 62.59 | 5.27 | 13.35 | |
1.71 | 4.66 | 3.41 | 1.73 | 1.84 | 3.21 | 1.48 | 4.12 | 3.11 | 1.77 | 12.14 | 1.37 | 2.88 | 64.23 | 3.02 | 64.86 | 1.68 | 52.14 | 2.24 | 2.93 | 4.08 | 6.16 | 14.36 | 6.48 | 1.49 | 1.96 | 43.96 | 1.97 | 3.81 | 3.35 | 2.88 | 59.22 | 3.99 | 4.51 | 2.75 | 3.4 | 5.09 | 3.08 | 2.76 | 64.39 | 2.74 | 79.99 | 5.26 | 1.82 | 68.47 | 4.45 | 6.12 | 5.65 | 0.57 | 0.29 | 0.66 | 0.34 | 3.59 | 29.58 | 1.14 | 6.63 | 3.06 | 2.12 | 3.38 | 3.14 | 35.42 | 2.81 | 9.17 | |
0.68 | 0.73 | 1.07 | 0.88 | 0.49 | 1.16 | 0.56 | 0.71 | 0.54 | 0.62 | 1.08 | 0.33 | 0.33 | 18.28 | 0.41 | 16.42 | 0.44 | 18.93 | 0.39 | 2.02 | 0.87 | 0.3 | 0.63 | 0.3 | 0.24 | 0.27 | 4.85 | 0.7 | 0.32 | 0.41 | 0.25 | 20.71 | 1.13 | 1.19 | 0.42 | 0.44 | 0.61 | 0.13 | 1.08 | 15.03 | 0.42 | 12.26 | 0.74 | 0.53 | 22.07 | 1.04 | 0.81 | 0.79 | 0.04 | 0.02 | 0.09 | 0.1 | 0.6 | 7.23 | 0.8 | 0.75 | 1.28 | 0.7 | 0.82 | 0.82 | 4.31 | 0.69 | 2.96 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)